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  5. Solyc11g007110.2.1

Solyc11g007110.2.1


Description : no hits & (original description: none)


Gene families : OG0002199 (Archaeplastida) Phylogenetic Tree(s): OG0002199_tree ,
OG_05_0001755 (LandPlants) Phylogenetic Tree(s): OG_05_0001755_tree ,
OG_06_0005749 (SeedPlants) Phylogenetic Tree(s): OG_06_0005749_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc11g007110.2.1
Cluster HCCA: Cluster_264

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01011273001 No alias No description available 0.1 Archaeplastida
Gb_21004 No alias no hits & (original description: none) 0.03 Archaeplastida
Gb_34987 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os05g34070.1 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_9398264g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
Mp1g01650.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e009475_P001 No alias no hits & (original description: none) 0.07 Archaeplastida
Zm00001e031674_P002 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e033627_P001 No alias no hits & (original description: none) 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0004527 exonuclease activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005667 transcription factor complex IEP Neighborhood
CC GO:0005669 transcription factor TFIID complex IEP Neighborhood
BP GO:0006352 DNA-templated transcription, initiation IEP Neighborhood
BP GO:0006354 DNA-templated transcription, elongation IEP Neighborhood
BP GO:0006368 transcription elongation from RNA polymerase II promoter IEP Neighborhood
CC GO:0008023 transcription elongation factor complex IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
BP GO:0016569 covalent chromatin modification IEP Neighborhood
BP GO:0016570 histone modification IEP Neighborhood
CC GO:0016593 Cdc73/Paf1 complex IEP Neighborhood
BP GO:0032774 RNA biosynthetic process IEP Neighborhood
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Neighborhood
CC GO:0044428 nuclear part IEP Neighborhood
CC GO:0044451 nucleoplasm part IEP Neighborhood
CC GO:0044798 nuclear transcription factor complex IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
CC GO:0090575 RNA polymerase II transcription factor complex IEP Neighborhood
InterPro domains Description Start Stop
IPR001374 R3H_dom 96 158
IPR024771 SUZ 187 235
No external refs found!