Solyc11g007280.3.1

Description : subfamily ABCG transporter

Gene families : OG0000050 (Archaeplastida) Phylogenetic Tree(s): OG0000050_tree ,
OG_05_0000049 (LandPlants) Phylogenetic Tree(s): OG_05_0000049_tree ,
OG_06_0000052 (SeedPlants) Phylogenetic Tree(s): OG_06_0000052_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc11g007280.3.1
Cluster	HCCA: Cluster_99

Target	Alias	Description	ECC score	Gene Family Method
LOC_Os09g16449.1	No alias	subfamily ABCG transporter	0.04	Archaeplastida
MA_10429200g0010	No alias	ABC transporter G family member 34 OS=Arabidopsis...	0.02	Archaeplastida
MA_30116g0010	No alias	no description available(sp\|h6ws94\|pdr1_pethy : 347.0)	0.04	Archaeplastida
Mp2g07030.1	No alias	subfamily ABCG transporter	0.03	Archaeplastida
Pp3c12_17520V3.1	No alias	ABC-2 and Plant PDR ABC-type transporter family protein	0.04	Archaeplastida
Pp3c5_23360V3.1	No alias	pleiotropic drug resistance 7	0.02	Archaeplastida
Solyc02g081870.4.1	No alias	abscisic acid transporter (ABCG31). subfamily ABCG transporter	0.07	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
MF	GO:0008144	drug binding	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATPase activity	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	nucleoside-triphosphatase activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0000160	phosphorelay signal transduction system	IEP	Neighborhood
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEP	Neighborhood
MF	GO:0004650	polygalacturonase activity	IEP	Neighborhood
BP	GO:0007165	signal transduction	IEP	Neighborhood
MF	GO:0008146	sulfotransferase activity	IEP	Neighborhood
BP	GO:0010215	cellulose microfibril organization	IEP	Neighborhood
BP	GO:0016043	cellular component organization	IEP	Neighborhood
MF	GO:0016782	transferase activity, transferring sulfur-containing groups	IEP	Neighborhood
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEP	Neighborhood
BP	GO:0030198	extracellular matrix organization	IEP	Neighborhood
CC	GO:0031225	anchored component of membrane	IEP	Neighborhood
BP	GO:0035556	intracellular signal transduction	IEP	Neighborhood
BP	GO:0043062	extracellular structure organization	IEP	Neighborhood
BP	GO:0071840	cellular component organization or biogenesis	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR013525	ABC_2_trans	529	741
IPR013525	ABC_2_trans	1192	1405
IPR013581	PDR_assoc	746	811
IPR003439	ABC_transporter-like	895	1047
IPR029481	ABC_trans_N	76	168
IPR003439	ABC_transporter-like	193	375

External Links

No external refs found!