Solyc11g007580.3.1

Description : methylcytosine-specific DNA glycosylase (ROS1)

Gene families : OG0001102 (Archaeplastida) Phylogenetic Tree(s): OG0001102_tree ,
OG_05_0001721 (LandPlants) Phylogenetic Tree(s): OG_05_0001721_tree ,
OG_06_0001624 (SeedPlants) Phylogenetic Tree(s): OG_06_0001624_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc11g007580.3.1
Cluster	HCCA: Cluster_58

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00040p00215000	evm_27.TU.AmTr_v1...	DNA damage response.DNA repair mechanisms.base excision...	0.02	Archaeplastida
Gb_09301	No alias	methylcytosine-specific DNA glycosylase (ROS1)	0.05	Archaeplastida
Gb_25446	No alias	methylcytosine-specific DNA glycosylase (ROS1)....	0.03	Archaeplastida
Solyc09g009080.4.1	No alias	methylcytosine-specific DNA glycosylase (ROS1)....	0.04	Archaeplastida
Zm00001e031766_P003	No alias	methylcytosine-specific DNA glycosylase (ROS1)....	0.05	Archaeplastida

Type	GO Term	Name	Evidence	Source
No GO annotation available for this sequence

Type	GO Term	Name	Evidence	Source
MF	GO:0004435	phosphatidylinositol phospholipase C activity	IEP	Neighborhood
MF	GO:0004620	phospholipase activity	IEP	Neighborhood
MF	GO:0004629	phospholipase C activity	IEP	Neighborhood
MF	GO:0005509	calcium ion binding	IEP	Neighborhood
BP	GO:0007165	signal transduction	IEP	Neighborhood
MF	GO:0008081	phosphoric diester hydrolase activity	IEP	Neighborhood
MF	GO:0016298	lipase activity	IEP	Neighborhood
MF	GO:0016853	isomerase activity	IEP	Neighborhood
BP	GO:0035556	intracellular signal transduction	IEP	Neighborhood
MF	GO:0042578	phosphoric ester hydrolase activity	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR028924	Perm-CXXC	1700	1731
IPR028925	RRM_DME	1734	1834

External Links

No external refs found!