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  5. AMTR_s00032p00036450

AMTR_s00032p00036450 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00032.16

Description : Patellin-4 OS=Arabidopsis thaliana


Gene families : OG0000809 (Archaeplastida) Phylogenetic Tree(s): OG0000809_tree ,
OG_05_0000939 (LandPlants) Phylogenetic Tree(s): OG_05_0000939_tree ,
OG_06_0001148 (SeedPlants) Phylogenetic Tree(s): OG_06_0001148_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00032p00036450
Cluster HCCA: Cluster_39

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00070p00121170 evm_27.TU.AmTr_v1... Patellin-3 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01000569001 No alias Patellin-6 OS=Arabidopsis thaliana 0.01 Archaeplastida
GSVIVT01028342001 No alias Patellin-4 OS=Arabidopsis thaliana 0.01 Archaeplastida
GSVIVT01036782001 No alias Patellin-4 OS=Arabidopsis thaliana 0.07 Archaeplastida
LOC_Os05g27820.1 No alias Patellin-6 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os05g35460.1 No alias Patellin-5 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_139640g0010 No alias Patellin-4 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_9244g0010 No alias Patellin-5 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Mp4g06280.1 No alias Patellin-6 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Mp4g16720.1 No alias Patellin-6 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Solyc09g025230.4.1 No alias Patellin-5 OS=Arabidopsis thaliana... 0.1 Archaeplastida
Zm00001e031502_P004 No alias Patellin-6 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e031729_P005 No alias Patellin-5 OS=Arabidopsis thaliana... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP Neighborhood
CC GO:0000428 DNA-directed RNA polymerase complex IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0004674 protein serine/threonine kinase activity IEP Neighborhood
MF GO:0004721 phosphoprotein phosphatase activity IEP Neighborhood
MF GO:0005088 Ras guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005089 Rho guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005543 phospholipid binding IEP Neighborhood
CC GO:0005666 RNA polymerase III complex IEP Neighborhood
CC GO:0005741 mitochondrial outer membrane IEP Neighborhood
CC GO:0005811 lipid droplet IEP Neighborhood
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP Neighborhood
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP Neighborhood
BP GO:0006383 transcription by RNA polymerase III IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006470 protein dephosphorylation IEP Neighborhood
BP GO:0006629 lipid metabolic process IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0007275 multicellular organism development IEP Neighborhood
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0008289 lipid binding IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
CC GO:0012511 monolayer-surrounded lipid storage body IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
BP GO:0016311 dephosphorylation IEP Neighborhood
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0017016 Ras GTPase binding IEP Neighborhood
MF GO:0017048 Rho GTPase binding IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
CC GO:0019867 outer membrane IEP Neighborhood
BP GO:0030259 lipid glycosylation IEP Neighborhood
CC GO:0030880 RNA polymerase complex IEP Neighborhood
MF GO:0031267 small GTPase binding IEP Neighborhood
CC GO:0031966 mitochondrial membrane IEP Neighborhood
CC GO:0031968 organelle outer membrane IEP Neighborhood
BP GO:0032501 multicellular organismal process IEP Neighborhood
BP GO:0032502 developmental process IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
CC GO:0044459 plasma membrane part IEP Neighborhood
BP GO:0048856 anatomical structure development IEP Neighborhood
CC GO:0055029 nuclear DNA-directed RNA polymerase complex IEP Neighborhood
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
CC GO:0098588 bounding membrane of organelle IEP Neighborhood
CC GO:0098797 plasma membrane protein complex IEP Neighborhood
CC GO:0098805 whole membrane IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
CC GO:1990234 transferase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR001251 CRAL-TRIO_dom 429 588
IPR011074 CRAL/TRIO_N_dom 360 404
No external refs found!