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  5. Solyc11g008890.2.1

Solyc11g008890.2.1


Description : manganese/calcium cation transporter (BICAT)


Gene families : OG0001833 (Archaeplastida) Phylogenetic Tree(s): OG0001833_tree ,
OG_05_0005248 (LandPlants) Phylogenetic Tree(s): OG_05_0005248_tree ,
OG_06_0005923 (SeedPlants) Phylogenetic Tree(s): OG_06_0005923_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc11g008890.2.1
Cluster HCCA: Cluster_264

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00129090 evm_27.TU.AmTr_v1... GDT1-like protein 5 OS=Arabidopsis thaliana 0.04 Archaeplastida
AT1G25520 No alias Uncharacterized protein family (UPF0016) 0.06 Archaeplastida
AT5G36290 No alias Uncharacterized protein family (UPF0016) 0.03 Archaeplastida
LOC_Os11g28300.1 No alias manganese/calcium cation transporter (BICAT) 0.05 Archaeplastida
Solyc05g009690.3.1 No alias manganese/calcium cation transporter (BICAT) 0.06 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005575 cellular_component IEP Neighborhood
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to ER IEP Neighborhood
MF GO:0015291 secondary active transmembrane transporter activity IEP Neighborhood
MF GO:0015297 antiporter activity IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
BP GO:0048193 Golgi vesicle transport IEP Neighborhood
InterPro domains Description Start Stop
IPR001727 Gdt1 85 158
IPR001727 Gdt1 209 281
No external refs found!