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  5. Solyc11g010100.2.1

Solyc11g010100.2.1


Description : A-class RAB GTPase


Gene families : OG0000173 (Archaeplastida) Phylogenetic Tree(s): OG0000173_tree ,
OG_05_0001287 (LandPlants) Phylogenetic Tree(s): OG_05_0001287_tree ,
OG_06_0001319 (SeedPlants) Phylogenetic Tree(s): OG_06_0001319_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc11g010100.2.1
Cluster HCCA: Cluster_135

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00103890 evm_27.TU.AmTr_v1... Vesicle trafficking.regulation of membrane tethering and... 0.03 Archaeplastida
AT1G16920 ATRABA1B, RAB11, RABA1b RAB GTPase homolog A1B 0.03 Archaeplastida
AT3G15060 AtRABA1g, RABA1g RAB GTPase homolog A1G 0.03 Archaeplastida
GSVIVT01020651001 No alias Ras-related protein RABA1e OS=Arabidopsis thaliana 0.05 Archaeplastida
GSVIVT01021253001 No alias Vesicle trafficking.regulation of membrane tethering and... 0.06 Archaeplastida
Gb_37703 No alias A-class RAB GTPase 0.02 Archaeplastida
LOC_Os06g50060.1 No alias A-class RAB GTPase 0.08 Archaeplastida
MA_10428137g0010 No alias A-class RAB GTPase 0.02 Archaeplastida
Mp3g12050.1 No alias A-class RAB GTPase 0.03 Archaeplastida
Pp3c20_15610V3.1 No alias RAB GTPase homolog A4D 0.06 Archaeplastida
Smo146310 No alias Vesicle trafficking.regulation of membrane tethering and... 0.02 Archaeplastida
Zm00001e000673_P001 No alias A-class RAB GTPase 0.02 Archaeplastida
Zm00001e006210_P001 No alias A-class RAB GTPase 0.04 Archaeplastida
Zm00001e009615_P001 No alias A-class RAB GTPase 0.03 Archaeplastida
Zm00001e027669_P001 No alias A-class RAB GTPase 0.04 Archaeplastida
Zm00001e031368_P002 No alias A-class RAB GTPase 0.03 Archaeplastida
Zm00001e037250_P001 No alias A-class RAB GTPase 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
InterPro domains Description Start Stop
IPR001806 Small_GTPase 19 178
No external refs found!