Solyc11g010160.1.1

Description : Disease resistance protein RPM1 OS=Arabidopsis thaliana (sp|q39214|rpm1_arath : 355.0)

Gene families : OG0000088 (Archaeplastida) Phylogenetic Tree(s): OG0000088_tree ,
OG_05_0000027 (LandPlants) Phylogenetic Tree(s): OG_05_0000027_tree ,
OG_06_0000027 (SeedPlants) Phylogenetic Tree(s): OG_06_0000027_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc11g010160.1.1

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00044p00195990	evm_27.TU.AmTr_v1...	Probable disease resistance RPP8-like protein 2...	0.07	Archaeplastida
AMTR_s00061p00205330	evm_27.TU.AmTr_v1...	Probable disease resistance RPP8-like protein 2...	0.02	Archaeplastida
AT1G58390	No alias	Disease resistance protein (CC-NBS-LRR class) family	0.03	Archaeplastida
AT1G58848	No alias	Disease resistance protein (CC-NBS-LRR class) family	0.01	Archaeplastida
AT1G59218	No alias	Disease resistance protein (CC-NBS-LRR class) family	0.01	Archaeplastida
AT1G59780	No alias	NB-ARC domain-containing disease resistance protein	0.03	Archaeplastida
AT3G50950	ZAR1	HOPZ-ACTIVATED RESISTANCE 1	0.02	Archaeplastida
GSVIVT01007238001	No alias	Disease resistance protein RPM1 OS=Arabidopsis thaliana	0.03	Archaeplastida
GSVIVT01026742001	No alias	Putative disease resistance protein At1g50180...	0.03	Archaeplastida
GSVIVT01026745001	No alias	Putative disease resistance protein At1g50180...	0.04	Archaeplastida
GSVIVT01026747001	No alias	Putative disease resistance protein At1g50180...	0.05	Archaeplastida
GSVIVT01032830001	No alias	Probable disease resistance RPP8-like protein 2...	0.02	Archaeplastida
Gb_26463	No alias	Putative disease resistance protein RGA4 OS=Solanum...	0.02	Archaeplastida
LOC_Os08g16070.1	No alias	Disease resistance protein RPM1 OS=Arabidopsis thaliana...	0.02	Archaeplastida
LOC_Os11g12320.1	No alias	Disease resistance protein RPM1 OS=Arabidopsis thaliana...	0.02	Archaeplastida
Solyc02g084890.3.1	No alias	Disease resistance RPP13-like protein 4 OS=Arabidopsis...	0.01	Archaeplastida
Solyc04g009240.2.1	No alias	Disease resistance protein RPP13 OS=Arabidopsis thaliana...	0.02	Archaeplastida
Solyc07g039410.3.1	No alias	Putative disease resistance RPP13-like protein 3...	0.02	Archaeplastida
Solyc07g039420.1.1	No alias	Disease resistance protein RPP13 OS=Arabidopsis thaliana...	0.08	Archaeplastida
Zm00001e039751_P001	No alias	Disease resistance protein RPM1 OS=Arabidopsis thaliana...	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043531	ADP binding	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003700	DNA-binding transcription factor activity	IEP	Neighborhood
BP	GO:0006355	regulation of transcription, DNA-templated	IEP	Neighborhood
BP	GO:0006508	proteolysis	IEP	Neighborhood
MF	GO:0008233	peptidase activity	IEP	Neighborhood
MF	GO:0008234	cysteine-type peptidase activity	IEP	Neighborhood
BP	GO:0009889	regulation of biosynthetic process	IEP	Neighborhood
BP	GO:0010468	regulation of gene expression	IEP	Neighborhood
BP	GO:0010556	regulation of macromolecule biosynthetic process	IEP	Neighborhood
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	IEP	Neighborhood
BP	GO:0019222	regulation of metabolic process	IEP	Neighborhood
BP	GO:0031323	regulation of cellular metabolic process	IEP	Neighborhood
BP	GO:0031326	regulation of cellular biosynthetic process	IEP	Neighborhood
MF	GO:0043565	sequence-specific DNA binding	IEP	Neighborhood
BP	GO:0051171	regulation of nitrogen compound metabolic process	IEP	Neighborhood
BP	GO:0051252	regulation of RNA metabolic process	IEP	Neighborhood
BP	GO:0060255	regulation of macromolecule metabolic process	IEP	Neighborhood
MF	GO:0070011	peptidase activity, acting on L-amino acid peptides	IEP	Neighborhood
BP	GO:0080090	regulation of primary metabolic process	IEP	Neighborhood
MF	GO:0140110	transcription regulator activity	IEP	Neighborhood
BP	GO:1903506	regulation of nucleic acid-templated transcription	IEP	Neighborhood
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	IEP	Neighborhood
BP	GO:2001141	regulation of RNA biosynthetic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR002182	NB-ARC	174	416
IPR001611	Leu-rich_rpt	577	631

External Links

No external refs found!

Solyc11g010160.1.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation