Description : Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana (sp|q94hw2|polr1_arath : 169.0)
Gene families : OG0000375 (Archaeplastida) Phylogenetic Tree(s): OG0000375_tree ,
OG_05_0000187 (LandPlants) Phylogenetic Tree(s): OG_05_0000187_tree ,
OG_06_0000080 (SeedPlants) Phylogenetic Tree(s): OG_06_0000080_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Solyc11g010245.1.1 | |
Cluster | HCCA: Cluster_82 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Solyc09g065525.1.1 | No alias | Retrovirus-related Pol polyprotein from transposon RE1... | 0.06 | Archaeplastida | |
Solyc10g044988.1.1 | No alias | Retrovirus-related Pol polyprotein from transposon RE1... | 0.06 | Archaeplastida | |
Solyc11g032025.1.1 | No alias | Retrovirus-related Pol polyprotein from transposon RE1... | 0.04 | Archaeplastida | |
Solyc12g019235.1.1 | No alias | No annotation | 0.05 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0005737 | cytoplasm | IEP | Neighborhood |
BP | GO:0005975 | carbohydrate metabolic process | IEP | Neighborhood |
BP | GO:0006020 | inositol metabolic process | IEP | Neighborhood |
BP | GO:0006066 | alcohol metabolic process | IEP | Neighborhood |
BP | GO:0016052 | carbohydrate catabolic process | IEP | Neighborhood |
MF | GO:0016701 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen | IEP | Neighborhood |
MF | GO:0016840 | carbon-nitrogen lyase activity | IEP | Neighborhood |
MF | GO:0016843 | amine-lyase activity | IEP | Neighborhood |
MF | GO:0016844 | strictosidine synthase activity | IEP | Neighborhood |
BP | GO:0019310 | inositol catabolic process | IEP | Neighborhood |
BP | GO:0019751 | polyol metabolic process | IEP | Neighborhood |
BP | GO:0044275 | cellular carbohydrate catabolic process | IEP | Neighborhood |
BP | GO:0044282 | small molecule catabolic process | IEP | Neighborhood |
BP | GO:0046164 | alcohol catabolic process | IEP | Neighborhood |
BP | GO:0046174 | polyol catabolic process | IEP | Neighborhood |
MF | GO:0050113 | inositol oxygenase activity | IEP | Neighborhood |
BP | GO:1901615 | organic hydroxy compound metabolic process | IEP | Neighborhood |
BP | GO:1901616 | organic hydroxy compound catabolic process | IEP | Neighborhood |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR013103 | RVT_2 | 3 | 73 |
No external refs found! |