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  5. Solyc11g010260.3.1

Solyc11g010260.3.1


Description : Pentatricopeptide repeat-containing protein At1g28690, mitochondrial OS=Arabidopsis thaliana (sp|q1pfq9|ppr62_arath : 598.0)


Gene families : OG0012983 (Archaeplastida) Phylogenetic Tree(s): OG0012983_tree ,
OG_05_0012948 (LandPlants) Phylogenetic Tree(s): OG_05_0012948_tree ,
OG_06_0013004 (SeedPlants) Phylogenetic Tree(s): OG_06_0013004_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc11g010260.3.1
Cluster HCCA: Cluster_75

Target Alias Description ECC score Gene Family Method Actions
LOC_Os03g25380.1 No alias Pentatricopeptide repeat-containing protein At1g28690,... 0.09 Archaeplastida
Zm00001e024014_P001 No alias no hits & (original description: none) 0.06 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 145 170
IPR002885 Pentatricopeptide_repeat 218 247
IPR002885 Pentatricopeptide_repeat 379 428
IPR002885 Pentatricopeptide_repeat 277 325
No external refs found!