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  5. AMTR_s00032p00050810

AMTR_s00032p00050810 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00032.31

Description : Lipid metabolism.sphingolipid metabolism.sphingolipid fatty acid 2-hydroxylase


Gene families : OG0003016 (Archaeplastida) Phylogenetic Tree(s): OG0003016_tree ,
OG_05_0003996 (LandPlants) Phylogenetic Tree(s): OG_05_0003996_tree ,
OG_06_0005245 (SeedPlants) Phylogenetic Tree(s): OG_06_0005245_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00032p00050810
Cluster HCCA: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01021712001 No alias Lipid metabolism.sphingolipid metabolism.sphingolipid... 0.01 Archaeplastida
Gb_15196 No alias sphingolipid fatty acid 2-hydroxylase 0.03 Archaeplastida
Gb_20420 No alias sphingolipid fatty acid 2-hydroxylase 0.03 Archaeplastida
Pp3c14_25720V3.1 No alias fatty acid hydroxylase 2 0.02 Archaeplastida
Zm00001e003301_P001 No alias sphingolipid fatty acid 2-hydroxylase 0.03 Archaeplastida
Zm00001e005884_P001 No alias sphingolipid fatty acid 2-hydroxylase 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEA Interproscan
BP GO:0006633 fatty acid biosynthetic process IEA Interproscan
MF GO:0016491 oxidoreductase activity IEA Interproscan
BP GO:0055114 oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000103 sulfate assimilation IEP Neighborhood
MF GO:0003779 actin binding IEP Neighborhood
MF GO:0004020 adenylylsulfate kinase activity IEP Neighborhood
MF GO:0005092 GDP-dissociation inhibitor activity IEP Neighborhood
MF GO:0005094 Rho GDP-dissociation inhibitor activity IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005737 cytoplasm IEP Neighborhood
CC GO:0005811 lipid droplet IEP Neighborhood
CC GO:0005856 cytoskeleton IEP Neighborhood
BP GO:0006020 inositol metabolic process IEP Neighborhood
BP GO:0006897 endocytosis IEP Neighborhood
BP GO:0006909 phagocytosis IEP Neighborhood
CC GO:0012511 monolayer-surrounded lipid storage body IEP Neighborhood
BP GO:0016192 vesicle-mediated transport IEP Neighborhood
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Neighborhood
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Neighborhood
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP Neighborhood
MF GO:0016790 thiolester hydrolase activity IEP Neighborhood
MF GO:0019205 nucleobase-containing compound kinase activity IEP Neighborhood
BP GO:0019310 inositol catabolic process IEP Neighborhood
BP GO:0019751 polyol metabolic process IEP Neighborhood
MF GO:0030695 GTPase regulator activity IEP Neighborhood
CC GO:0043228 non-membrane-bounded organelle IEP Neighborhood
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Neighborhood
BP GO:0044275 cellular carbohydrate catabolic process IEP Neighborhood
BP GO:0046164 alcohol catabolic process IEP Neighborhood
BP GO:0046174 polyol catabolic process IEP Neighborhood
MF GO:0050113 inositol oxygenase activity IEP Neighborhood
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Neighborhood
BP GO:0098657 import into cell IEP Neighborhood
BP GO:1901616 organic hydroxy compound catabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR006694 Fatty_acid_hydroxylase 89 206
No external refs found!