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  5. AMTR_s00032p00075540

AMTR_s00032p00075540 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00032.46

No description available


Gene families : OG0000575 (Archaeplastida) Phylogenetic Tree(s): OG0000575_tree ,
OG_05_0000284 (LandPlants) Phylogenetic Tree(s): OG_05_0000284_tree ,
OG_06_0000267 (SeedPlants) Phylogenetic Tree(s): OG_06_0000267_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00032p00075540
Cluster HCCA: Cluster_45

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00264290 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00022p00089900 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AMTR_s00174p00064310 evm_27.TU.AmTr_v1... Auxin-responsive protein SAUR72 OS=Arabidopsis thaliana 0.05 Archaeplastida
AT1G79130 No alias SAUR-like auxin-responsive protein family 0.04 Archaeplastida
AT3G12830 No alias SAUR-like auxin-responsive protein family 0.03 Archaeplastida
Gb_38676 No alias Auxin-responsive protein SAUR71 OS=Arabidopsis thaliana... 0.05 Archaeplastida
LOC_Os01g56240.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os03g45850.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os12g43110.1 No alias no hits & (original description: none) 0.06 Archaeplastida
MA_40406g0010 No alias Auxin-responsive protein SAUR71 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc07g045060.1.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e006929_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e037770_P001 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0005199 structural constituent of cell wall IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0006952 defense response IEP Neighborhood
MF GO:0008171 O-methyltransferase activity IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
BP GO:0009607 response to biotic stimulus IEP Neighborhood
BP GO:0009664 plant-type cell wall organization IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016706 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
BP GO:0045229 external encapsulating structure organization IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
MF GO:0051213 dioxygenase activity IEP Neighborhood
MF GO:0052689 carboxylic ester hydrolase activity IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:0071554 cell wall organization or biogenesis IEP Neighborhood
BP GO:0071555 cell wall organization IEP Neighborhood
BP GO:0071669 plant-type cell wall organization or biogenesis IEP Neighborhood
InterPro domains Description Start Stop
IPR003676 SAUR_fam 18 92
No external refs found!