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  5. Solyc11g012270.2.1

Solyc11g012270.2.1


Description : guanine nucleotide dissociation inhibitor (RopGDI)


Gene families : OG0001502 (Archaeplastida) Phylogenetic Tree(s): OG0001502_tree ,
OG_05_0001033 (LandPlants) Phylogenetic Tree(s): OG_05_0001033_tree ,
OG_06_0001602 (SeedPlants) Phylogenetic Tree(s): OG_06_0001602_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc11g012270.2.1
Cluster HCCA: Cluster_116

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00005p00173830 evm_27.TU.AmTr_v1... Multi-process regulation.Rop GTPase regulatory... 0.03 Archaeplastida
AT3G07880 SCN1 Immunoglobulin E-set superfamily protein 0.04 Archaeplastida
GSVIVT01003335001 No alias Multi-process regulation.Rop GTPase regulatory... 0.03 Archaeplastida
GSVIVT01030419001 No alias Multi-process regulation.Rop GTPase regulatory... 0.03 Archaeplastida
LOC_Os02g48730.1 No alias guanine nucleotide dissociation inhibitor (RopGDI) 0.02 Archaeplastida
Zm00001e027139_P001 No alias guanine nucleotide dissociation inhibitor (RopGDI) 0.03 Archaeplastida
Zm00001e031533_P001 No alias guanine nucleotide dissociation inhibitor (RopGDI) 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005094 Rho GDP-dissociation inhibitor activity IEA Interproscan
CC GO:0005737 cytoplasm IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0003924 GTPase activity IEP Neighborhood
MF GO:0004650 polygalacturonase activity IEP Neighborhood
BP GO:0006644 phospholipid metabolic process IEP Neighborhood
BP GO:0006650 glycerophospholipid metabolic process IEP Neighborhood
BP GO:0006996 organelle organization IEP Neighborhood
BP GO:0007010 cytoskeleton organization IEP Neighborhood
BP GO:0007034 vacuolar transport IEP Neighborhood
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
BP GO:0046486 glycerolipid metabolic process IEP Neighborhood
BP GO:0046488 phosphatidylinositol metabolic process IEP Neighborhood
MF GO:0051287 NAD binding IEP Neighborhood
InterPro domains Description Start Stop
IPR000406 Rho_GDI 69 256
No external refs found!