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  5. Solyc11g013320.2.1

Solyc11g013320.2.1


Description : protease (RBL)


Gene families : OG0000617 (Archaeplastida) Phylogenetic Tree(s): OG0000617_tree ,
OG_05_0000454 (LandPlants) Phylogenetic Tree(s): OG_05_0000454_tree ,
OG_06_0000396 (SeedPlants) Phylogenetic Tree(s): OG_06_0000396_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc11g013320.2.1
Cluster HCCA: Cluster_254

Target Alias Description ECC score Gene Family Method Actions
AT1G63120 RBL2, ATRBL2 RHOMBOID-like 2 0.04 Archaeplastida
AT1G77860 KOM Rhomboid-related intramembrane serine protease family protein 0.07 Archaeplastida
GSVIVT01008957001 No alias Protein degradation.peptidase families.serine-type... 0.08 Archaeplastida
LOC_Os08g43320.1 No alias protease (RBL) 0.03 Archaeplastida
Pp3c17_14100V3.1 No alias RHOMBOID-like 1 0.02 Archaeplastida
Zm00001e007219_P001 No alias protease (RBL) 0.04 Archaeplastida
Zm00001e024265_P001 No alias protease (RBL) 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004252 serine-type endopeptidase activity IEA Interproscan
CC GO:0016021 integral component of membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP Neighborhood
MF GO:0004519 endonuclease activity IEP Neighborhood
MF GO:0004521 endoribonuclease activity IEP Neighborhood
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP Neighborhood
MF GO:0004540 ribonuclease activity IEP Neighborhood
MF GO:0008061 chitin binding IEP Neighborhood
MF GO:0008134 transcription factor binding IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Neighborhood
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Neighborhood
MF GO:0017025 TBP-class protein binding IEP Neighborhood
MF GO:0045300 acyl-[acyl-carrier-protein] desaturase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR022764 Peptidase_S54_rhomboid_dom 119 257
No external refs found!