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  5. Solyc11g013550.2.1

Solyc11g013550.2.1


Description : no hits & (original description: none)


Gene families : OG0005888 (Archaeplastida) Phylogenetic Tree(s): OG0005888_tree ,
OG_05_0004876 (LandPlants) Phylogenetic Tree(s): OG_05_0004876_tree ,
OG_06_0005931 (SeedPlants) Phylogenetic Tree(s): OG_06_0005931_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc11g013550.2.1
Cluster HCCA: Cluster_244

Target Alias Description ECC score Gene Family Method Actions
AT1G36980 No alias unknown protein; CONTAINS InterPro DOMAIN/s:... 0.03 Archaeplastida
Cre01.g042950 No alias No description available 0.04 Archaeplastida
LOC_Os09g27960.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Pp3c1_10200V3.1 No alias No annotation 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000976 transcription regulatory region sequence-specific DNA binding IEP Neighborhood
MF GO:0000977 RNA polymerase II regulatory region sequence-specific DNA binding IEP Neighborhood
MF GO:0001012 RNA polymerase II regulatory region DNA binding IEP Neighborhood
MF GO:0001067 regulatory region nucleic acid binding IEP Neighborhood
MF GO:0003779 actin binding IEP Neighborhood
CC GO:0005743 mitochondrial inner membrane IEP Neighborhood
BP GO:0006790 sulfur compound metabolic process IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006839 mitochondrial transport IEP Neighborhood
BP GO:0006848 pyruvate transport IEP Neighborhood
BP GO:0006850 mitochondrial pyruvate transmembrane transport IEP Neighborhood
BP GO:0015711 organic anion transport IEP Neighborhood
BP GO:0015718 monocarboxylic acid transport IEP Neighborhood
BP GO:0015849 organic acid transport IEP Neighborhood
BP GO:0016192 vesicle-mediated transport IEP Neighborhood
BP GO:0016226 iron-sulfur cluster assembly IEP Neighborhood
CC GO:0019866 organelle inner membrane IEP Neighborhood
BP GO:0022904 respiratory electron transport chain IEP Neighborhood
CC GO:0030008 TRAPP complex IEP Neighborhood
CC GO:0031090 organelle membrane IEP Neighborhood
BP GO:0031163 metallo-sulfur cluster assembly IEP Neighborhood
CC GO:0031966 mitochondrial membrane IEP Neighborhood
MF GO:0032422 purine-rich negative regulatory element binding IEP Neighborhood
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP Neighborhood
BP GO:0034220 ion transmembrane transport IEP Neighborhood
MF GO:0044212 transcription regulatory region DNA binding IEP Neighborhood
BP GO:0046942 carboxylic acid transport IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0071702 organic substance transport IEP Neighborhood
BP GO:0098656 anion transmembrane transport IEP Neighborhood
CC GO:0099023 tethering complex IEP Neighborhood
BP GO:1901475 pyruvate transmembrane transport IEP Neighborhood
BP GO:1903825 organic acid transmembrane transport IEP Neighborhood
BP GO:1905039 carboxylic acid transmembrane transport IEP Neighborhood
BP GO:1990542 mitochondrial transmembrane transport IEP Neighborhood
MF GO:1990837 sequence-specific double-stranded DNA binding IEP Neighborhood
InterPro domains Description Start Stop
IPR007919 UPF0220 13 133
No external refs found!