1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc11g018600.1.1

Solyc11g018600.1.1


Description : Short-chain dehydrogenase reductase ATA1 OS=Arabidopsis thaliana (sp|q9m1k9|ata1_arath : 196.0)


Gene families : OG0000154 (Archaeplastida) Phylogenetic Tree(s): OG0000154_tree ,
OG_05_0000088 (LandPlants) Phylogenetic Tree(s): OG_05_0000088_tree ,
OG_06_0015038 (SeedPlants) Phylogenetic Tree(s): OG_06_0015038_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc11g018600.1.1
Cluster HCCA: Cluster_201

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00190670 evm_27.TU.AmTr_v1... Short-chain dehydrogenase reductase 3b OS=Arabidopsis thaliana 0.04 Archaeplastida
AMTR_s00030p00243810 evm_27.TU.AmTr_v1... Secoisolariciresinol dehydrogenase (Fragment)... 0.03 Archaeplastida
AMTR_s00030p00244570 evm_27.TU.AmTr_v1... Secoisolariciresinol dehydrogenase (Fragment)... 0.03 Archaeplastida
AMTR_s00044p00056720 evm_27.TU.AmTr_v1... Short-chain dehydrogenase reductase ATA1 OS=Arabidopsis thaliana 0.04 Archaeplastida
AT2G47140 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.03 Archaeplastida
AT3G26760 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.03 Archaeplastida
AT3G26770 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.01 Archaeplastida
AT3G29250 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.05 Archaeplastida
AT3G42960 ATA1, TA1, ASD TAPETUM 1 0.18 Archaeplastida
GSVIVT01008067001 No alias (-)-isopiperitenol/(-)-carveol dehydrogenase,... 0.04 Archaeplastida
GSVIVT01028200001 No alias Short-chain dehydrogenase reductase 3b OS=Arabidopsis thaliana 0.05 Archaeplastida
GSVIVT01030245001 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01033915001 No alias Secoisolariciresinol dehydrogenase (Fragment)... 0.01 Archaeplastida
GSVIVT01033916001 No alias Secoisolariciresinol dehydrogenase (Fragment)... 0.03 Archaeplastida
GSVIVT01036069001 No alias Secoisolariciresinol dehydrogenase (Fragment)... 0.03 Archaeplastida
Gb_00715 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis... 0.03 Archaeplastida
Gb_05035 No alias Secoisolariciresinol dehydrogenase (Fragment)... 0.05 Archaeplastida
Gb_05039 No alias Secoisolariciresinol dehydrogenase (Fragment)... 0.03 Archaeplastida
Gb_07560 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis... 0.02 Archaeplastida
Gb_07561 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis... 0.04 Archaeplastida
Gb_16803 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis... 0.03 Archaeplastida
Gb_17570 No alias Short-chain dehydrogenase reductase ATA1 OS=Arabidopsis... 0.03 Archaeplastida
Gb_19302 No alias Short-chain dehydrogenase reductase 3b OS=Arabidopsis... 0.02 Archaeplastida
Gb_19313 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis... 0.03 Archaeplastida
Gb_25236 No alias Momilactone A synthase OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
Gb_30884 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis... 0.03 Archaeplastida
Gb_34140 No alias Momilactone A synthase OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
Gb_35796 No alias Secoisolariciresinol dehydrogenase (Fragment)... 0.03 Archaeplastida
Gb_35889 No alias Secoisolariciresinol dehydrogenase (Fragment)... 0.04 Archaeplastida
Gb_41822 No alias Momilactone A synthase OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
LOC_Os03g18740.1 No alias Sex determination protein tasselseed-2 OS=Zea mays... 0.02 Archaeplastida
LOC_Os03g61740.1 No alias Short-chain dehydrogenase reductase 4 OS=Arabidopsis... 0.03 Archaeplastida
LOC_Os04g10000.1 No alias Momilactone A synthase OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
LOC_Os04g10010.1 No alias Momilactone A synthase OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
LOC_Os07g46840.1 No alias Tropinone reductase-like 2 OS=Erythroxylum coca... 0.05 Archaeplastida
LOC_Os07g46846.1 No alias Short-chain dehydrogenase reductase 4 OS=Arabidopsis... 0.02 Archaeplastida
LOC_Os07g46860.1 No alias Momilactone A synthase OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
LOC_Os07g46870.1 No alias Momilactone A synthase OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
LOC_Os07g46910.1 No alias Tropinone reductase-like 2 OS=Erythroxylum coca... 0.04 Archaeplastida
LOC_Os07g46920.1 No alias Secoisolariciresinol dehydrogenase (Fragment)... 0.02 Archaeplastida
MA_10436701g0010 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis... 0.02 Archaeplastida
MA_107740g0010 No alias Short-chain dehydrogenase reductase ATA1 OS=Arabidopsis... 0.05 Archaeplastida
MA_112182g0010 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis... 0.04 Archaeplastida
MA_164148g0010 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis... 0.03 Archaeplastida
MA_2492g0010 No alias xanthoxin oxidase (ABA2) 0.03 Archaeplastida
MA_7515994g0010 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis... 0.02 Archaeplastida
MA_903039g0010 No alias Short-chain dehydrogenase reductase 4 OS=Arabidopsis... 0.03 Archaeplastida
MA_932914g0010 No alias no hits & (original description: none) 0.01 Archaeplastida
MA_97011g0010 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis... 0.03 Archaeplastida
Mp1g17390.1 No alias Secoisolariciresinol dehydrogenase (Fragment)... 0.02 Archaeplastida
Mp3g24680.1 No alias Momilactone A synthase OS=Oryza sativa subsp. japonica... 0.06 Archaeplastida
Mp3g24690.1 No alias Momilactone A synthase OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
Mp3g24710.1 No alias Secoisolariciresinol dehydrogenase (Fragment)... 0.02 Archaeplastida
Mp5g00680.1 No alias Short-chain dehydrogenase reductase 3c OS=Arabidopsis... 0.02 Archaeplastida
Mp5g02670.1 No alias Zerumbone synthase OS=Zingiber zerumbet... 0.05 Archaeplastida
Mp6g11590.1 No alias Short-chain dehydrogenase reductase 4 OS=Arabidopsis... 0.02 Archaeplastida
Solyc09g074410.4.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Solyc12g056610.3.1 No alias Secoisolariciresinol dehydrogenase (Fragment)... 0.04 Archaeplastida
Solyc12g056710.3.1 No alias Secoisolariciresinol dehydrogenase (Fragment)... 0.04 Archaeplastida
Zm00001e008424_P001 No alias Momilactone A synthase OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
Zm00001e021516_P001 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis... 0.02 Archaeplastida
Zm00001e035437_P002 No alias Secoisolariciresinol dehydrogenase (Fragment)... 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004252 serine-type endopeptidase activity IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
MF GO:0008134 transcription factor binding IEP Neighborhood
MF GO:0008194 UDP-glycosyltransferase activity IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
MF GO:0016840 carbon-nitrogen lyase activity IEP Neighborhood
MF GO:0016843 amine-lyase activity IEP Neighborhood
MF GO:0016844 strictosidine synthase activity IEP Neighborhood
MF GO:0017025 TBP-class protein binding IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!