1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc11g021310.1.1

Solyc11g021310.1.1


Description : Protein TIC 214 OS=Solanum lycopersicum (sp|q2mi42|ti214_sollc : 662.0)


Gene families : OG0002413 (Archaeplastida) Phylogenetic Tree(s): OG0002413_tree ,
OG_05_0001662 (LandPlants) Phylogenetic Tree(s): OG_05_0001662_tree ,
OG_06_0001665 (SeedPlants) Phylogenetic Tree(s): OG_06_0001665_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc11g021310.1.1
Cluster HCCA: Cluster_3

Target Alias Description ECC score Gene Family Method Actions
AMTR_s03506p00006730 No alias Protein TIC 214 OS=Populus trichocarpa 0.05 Archaeplastida
AT2G07565 No alias No description available 0.02 Archaeplastida
ATCG01130 YCF1.2 Ycf1 protein 0.02 Archaeplastida
Solyc00g500040.1.1 No alias Protein TIC 214 OS=Solanum lycopersicum... 0.04 Archaeplastida
Solyc00g500191.1.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc00g500324.1.1 No alias component Tic214 of inner envelope TIC-20 complex 0.02 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0016021 integral component of membrane IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Neighborhood
BP GO:0006259 DNA metabolic process IEP Neighborhood
BP GO:0006281 DNA repair IEP Neighborhood
BP GO:0006284 base-excision repair IEP Neighborhood
BP GO:0006974 cellular response to DNA damage stimulus IEP Neighborhood
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP Neighborhood
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Neighborhood
MF GO:0019104 DNA N-glycosylase activity IEP Neighborhood
BP GO:0033554 cellular response to stress IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0051716 cellular response to stimulus IEP Neighborhood
MF GO:0140097 catalytic activity, acting on DNA IEP Neighborhood
InterPro domains Description Start Stop
IPR008896 TIC214 21 252
IPR008896 TIC214 248 385
No external refs found!