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  5. AMTR_s00032p00144550

AMTR_s00032p00144550 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00032.106

Description : Photosynthesis.photophosphorylation.photosystem I.PS-I complex.component PsaF


Gene families : OG0006070 (Archaeplastida) Phylogenetic Tree(s): OG0006070_tree ,
OG_05_0006033 (LandPlants) Phylogenetic Tree(s): OG_05_0006033_tree ,
OG_06_0007968 (SeedPlants) Phylogenetic Tree(s): OG_06_0007968_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00032p00144550
Cluster HCCA: Cluster_23

Target Alias Description ECC score Gene Family Method Actions
AT1G31330 PSAF photosystem I subunit F 0.28 Archaeplastida
Cre09.g412100 No alias Photosynthesis.photophosphorylation.photosystem I.PS-I... 0.18 Archaeplastida
Gb_12253 No alias component PsaF of PS-I complex 0.13 Archaeplastida
LOC_Os03g56670.1 No alias component PsaF of PS-I complex 0.21 Archaeplastida
MA_10090427g0010 No alias component PsaF of PS-I complex 0.14 Archaeplastida
Mp2g02960.1 No alias component PsaF of PS-I complex 0.24 Archaeplastida
Pp3c11_18230V3.1 No alias photosystem I subunit F 0.03 Archaeplastida
Pp3c18_10730V3.1 No alias photosystem I subunit F 0.21 Archaeplastida
Pp3c21_8800V3.1 No alias photosystem I subunit F 0.26 Archaeplastida
Pp3c22_10850V3.1 No alias photosystem I subunit F 0.22 Archaeplastida
Smo75361 No alias Photosynthesis.photophosphorylation.photosystem I.PS-I... 0.12 Archaeplastida
Solyc02g069450.3.1 No alias component PsaF of PS-I complex 0.19 Archaeplastida
Solyc02g069460.3.1 No alias component PsaF of PS-I complex 0.2 Archaeplastida
Zm00001e011931_P001 No alias component PsaF of PS-I complex 0.22 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0009522 photosystem I IEA Interproscan
CC GO:0009538 photosystem I reaction center IEA Interproscan
BP GO:0015979 photosynthesis IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0001505 regulation of neurotransmitter levels IEP Neighborhood
MF GO:0004047 aminomethyltransferase activity IEP Neighborhood
MF GO:0004751 ribose-5-phosphate isomerase activity IEP Neighborhood
MF GO:0005509 calcium ion binding IEP Neighborhood
MF GO:0005516 calmodulin binding IEP Neighborhood
CC GO:0005960 glycine cleavage complex IEP Neighborhood
BP GO:0006544 glycine metabolic process IEP Neighborhood
BP GO:0006546 glycine catabolic process IEP Neighborhood
BP GO:0006778 porphyrin-containing compound metabolic process IEP Neighborhood
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Neighborhood
BP GO:0009052 pentose-phosphate shunt, non-oxidative branch IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
BP GO:0009058 biosynthetic process IEP Neighborhood
BP GO:0009063 cellular amino acid catabolic process IEP Neighborhood
BP GO:0009069 serine family amino acid metabolic process IEP Neighborhood
BP GO:0009071 serine family amino acid catabolic process IEP Neighborhood
CC GO:0009507 chloroplast IEP Neighborhood
CC GO:0009523 photosystem II IEP Neighborhood
CC GO:0009536 plastid IEP Neighborhood
CC GO:0009654 photosystem II oxygen evolving complex IEP Neighborhood
BP GO:0010109 regulation of photosynthesis IEP Neighborhood
BP GO:0015985 energy coupled proton transport, down electrochemical gradient IEP Neighborhood
BP GO:0015986 ATP synthesis coupled proton transport IEP Neighborhood
BP GO:0015994 chlorophyll metabolic process IEP Neighborhood
BP GO:0015995 chlorophyll biosynthetic process IEP Neighborhood
BP GO:0016054 organic acid catabolic process IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016853 isomerase activity IEP Neighborhood
MF GO:0016860 intramolecular oxidoreductase activity IEP Neighborhood
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Neighborhood
BP GO:0017144 drug metabolic process IEP Neighborhood
BP GO:0019682 glyceraldehyde-3-phosphate metabolic process IEP Neighborhood
BP GO:0019693 ribose phosphate metabolic process IEP Neighborhood
MF GO:0019829 cation-transporting ATPase activity IEP Neighborhood
CC GO:0019898 extrinsic component of membrane IEP Neighborhood
MF GO:0022853 active ion transmembrane transporter activity IEP Neighborhood
MF GO:0030145 manganese ion binding IEP Neighborhood
CC GO:0034357 photosynthetic membrane IEP Neighborhood
BP GO:0042133 neurotransmitter metabolic process IEP Neighborhood
BP GO:0042135 neurotransmitter catabolic process IEP Neighborhood
BP GO:0042440 pigment metabolic process IEP Neighborhood
BP GO:0042548 regulation of photosynthesis, light reaction IEP Neighborhood
BP GO:0042549 photosystem II stabilization IEP Neighborhood
MF GO:0042625 ATPase coupled ion transmembrane transporter activity IEP Neighborhood
CC GO:0042651 thylakoid membrane IEP Neighborhood
BP GO:0042737 drug catabolic process IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
BP GO:0043467 regulation of generation of precursor metabolites and energy IEP Neighborhood
BP GO:0044281 small molecule metabolic process IEP Neighborhood
BP GO:0044282 small molecule catabolic process IEP Neighborhood
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP Neighborhood
BP GO:0046148 pigment biosynthetic process IEP Neighborhood
BP GO:0046395 carboxylic acid catabolic process IEP Neighborhood
MF GO:0046406 magnesium protoporphyrin IX methyltransferase activity IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP Neighborhood
MF GO:0051536 iron-sulfur cluster binding IEP Neighborhood
MF GO:0051540 metal cluster binding IEP Neighborhood
BP GO:0065008 regulation of biological quality IEP Neighborhood
BP GO:1901565 organonitrogen compound catabolic process IEP Neighborhood
BP GO:1901605 alpha-amino acid metabolic process IEP Neighborhood
BP GO:1901606 alpha-amino acid catabolic process IEP Neighborhood
CC GO:1902494 catalytic complex IEP Neighborhood
CC GO:1990204 oxidoreductase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR003666 PSI_PsaF 49 220
No external refs found!