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  5. AMTR_s00032p00150820

AMTR_s00032p00150820 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00032.117

Description : Protein translocation.endoplasmic reticulum.co-translational insertion system.SRP (signal recognition particle) receptor complex.SR-beta component


Gene families : OG0004355 (Archaeplastida) Phylogenetic Tree(s): OG0004355_tree ,
OG_05_0004253 (LandPlants) Phylogenetic Tree(s): OG_05_0004253_tree ,
OG_06_0003712 (SeedPlants) Phylogenetic Tree(s): OG_06_0003712_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00032p00150820
Cluster HCCA: Cluster_102

Target Alias Description ECC score Gene Family Method Actions
AT2G18770 No alias P-loop containing nucleoside triphosphate hydrolases... 0.02 Archaeplastida
Pp3c4_20930V3.1 No alias signal recognition particle binding 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0001882 nucleoside binding IEP Neighborhood
MF GO:0001883 purine nucleoside binding IEP Neighborhood
MF GO:0005525 GTP binding IEP Neighborhood
BP GO:0007264 small GTPase mediated signal transduction IEP Neighborhood
MF GO:0019001 guanyl nucleotide binding IEP Neighborhood
MF GO:0032549 ribonucleoside binding IEP Neighborhood
MF GO:0032550 purine ribonucleoside binding IEP Neighborhood
MF GO:0032561 guanyl ribonucleotide binding IEP Neighborhood
BP GO:0035556 intracellular signal transduction IEP Neighborhood
InterPro domains Description Start Stop
IPR019009 SRP_receptor_beta_su 38 218
No external refs found!