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  5. Solyc11g044490.1.1

Solyc11g044490.1.1


Description : Pentatricopeptide repeat-containing protein At1g15510, chloroplastic OS=Arabidopsis thaliana (sp|q9m9e2|ppr45_arath : 191.0)


Gene families : OG0017045 (Archaeplastida) Phylogenetic Tree(s): OG0017045_tree ,
OG_05_0016608 (LandPlants) Phylogenetic Tree(s): OG_05_0016608_tree ,
OG_06_0016219 (SeedPlants) Phylogenetic Tree(s): OG_06_0016219_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc11g044490.1.1
Cluster HCCA: Cluster_48

Target Alias Description ECC score Gene Family Method Actions
Solyc04g016310.3.1 No alias no hits & (original description: none) 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006399 tRNA metabolic process IEP Neighborhood
BP GO:0008033 tRNA processing IEP Neighborhood
CC GO:0009579 thylakoid IEP Neighborhood
BP GO:0015979 photosynthesis IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
MF GO:0016791 phosphatase activity IEP Neighborhood
BP GO:0034470 ncRNA processing IEP Neighborhood
MF GO:0042578 phosphoric ester hydrolase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 56 77
IPR002885 Pentatricopeptide_repeat 119 145
No external refs found!