1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc11g065480.3.1

Solyc11g065480.3.1


Description : no hits & (original description: none)


Gene families : OG0000262 (Archaeplastida) Phylogenetic Tree(s): OG0000262_tree ,
OG_05_0009852 (LandPlants) Phylogenetic Tree(s): OG_05_0009852_tree ,
OG_06_0010267 (SeedPlants) Phylogenetic Tree(s): OG_06_0010267_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc11g065480.3.1

Target Alias Description ECC score Gene Family Method Actions
AT5G41460 No alias Protein of unknown function (DUF604) 0.02 Archaeplastida
GSVIVT01034119001 No alias No description available 0.04 Archaeplastida
Gb_39622 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os02g45700.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os10g39020.2 No alias no hits & (original description: none) 0.02 Archaeplastida
Pp3c6_18560V3.1 No alias Protein of unknown function (DUF604) 0.03 Archaeplastida
Pp3c9_2080V3.1 No alias Protein of unknown function (DUF604) 0.03 Archaeplastida
Solyc12g056200.2.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e007164_P001 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0001871 pattern binding IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004650 polygalacturonase activity IEP Neighborhood
MF GO:0004857 enzyme inhibitor activity IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
MF GO:0008146 sulfotransferase activity IEP Neighborhood
MF GO:0008168 methyltransferase activity IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Neighborhood
MF GO:0016782 transferase activity, transferring sulfur-containing groups IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0030234 enzyme regulator activity IEP Neighborhood
MF GO:0030246 carbohydrate binding IEP Neighborhood
MF GO:0030247 polysaccharide binding IEP Neighborhood
MF GO:0030599 pectinesterase activity IEP Neighborhood
BP GO:0042545 cell wall modification IEP Neighborhood
BP GO:0045229 external encapsulating structure organization IEP Neighborhood
MF GO:0052689 carboxylic ester hydrolase activity IEP Neighborhood
BP GO:0071554 cell wall organization or biogenesis IEP Neighborhood
BP GO:0071555 cell wall organization IEP Neighborhood
MF GO:0098772 molecular function regulator IEP Neighborhood
InterPro domains Description Start Stop
IPR006740 DUF604 201 452
No external refs found!