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  5. Solyc11g065840.3.1

Solyc11g065840.3.1


Description : transcription factor (MYB)


Gene families : OG0000002 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000002 (LandPlants) Phylogenetic Tree(s): OG_05_0000002_tree ,
OG_06_0000006 (SeedPlants) Phylogenetic Tree(s): OG_06_0000006_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc11g065840.3.1
Cluster HCCA: Cluster_248

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00105570 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.06 Archaeplastida
AMTR_s00010p00261750 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AMTR_s00010p00267100 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
AMTR_s00022p00252530 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.09 Archaeplastida
AMTR_s00024p00137930 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.07 Archaeplastida
AMTR_s00036p00107460 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
AMTR_s00038p00183620 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.06 Archaeplastida
AMTR_s00186p00015620 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.08 Archaeplastida
AT1G17950 BW52, ATMYB52, MYB52 myb domain protein 52 0.11 Archaeplastida
AT1G34670 AtMYB93, MYB93 myb domain protein 93 0.03 Archaeplastida
AT1G63910 MYB103, AtMYB103 myb domain protein 103 0.1 Archaeplastida
AT1G68320 BW62B, BW62C,... myb domain protein 62 0.02 Archaeplastida
AT1G73410 MYB54, ATMYB54 myb domain protein 54 0.03 Archaeplastida
AT1G74080 ATMYB122, MYB122 myb domain protein 122 0.03 Archaeplastida
AT1G74650 ATMYB31, MYB31, ATY13 myb domain protein 31 0.05 Archaeplastida
AT1G79180 ATMYB63, MYB63 myb domain protein 63 0.1 Archaeplastida
AT3G02940 AtMYB107, MYB107 myb domain protein 107 0.03 Archaeplastida
AT3G08500 AtMYB83, MYB83 myb domain protein 83 0.02 Archaeplastida
AT3G11440 ATMYB65, MYB65 myb domain protein 65 0.05 Archaeplastida
AT3G13540 ATMYB5, MYB5 myb domain protein 5 0.02 Archaeplastida
AT3G27785 PGA37, ATMYB118, MYB118 myb domain protein 118 0.02 Archaeplastida
AT3G28470 ATMYB35, TDF1 Duplicated homeodomain-like superfamily protein 0.04 Archaeplastida
AT3G48920 MYB45, AtMYB45 myb domain protein 45 0.04 Archaeplastida
AT4G17785 MYB39 myb domain protein 39 0.03 Archaeplastida
AT4G22680 AtMYB85, MYB85 myb domain protein 85 0.1 Archaeplastida
AT4G33450 ATMYB69, MYB69 myb domain protein 69 0.1 Archaeplastida
AT4G37780 ATMYB87, MYB87 myb domain protein 87 0.05 Archaeplastida
AT5G10280 ATMYB64, ATMYB92, MYB92 myb domain protein 92 0.03 Archaeplastida
AT5G12870 ATMYB46, MYB46 myb domain protein 46 0.07 Archaeplastida
AT5G16770 MYB9, AtMYB9 myb domain protein 9 0.03 Archaeplastida
AT5G54230 MYB49, AtMYB49 myb domain protein 49 0.08 Archaeplastida
AT5G57620 MYB36, AtMYB36 myb domain protein 36 0.03 Archaeplastida
GSVIVT01004317001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.1 Archaeplastida
GSVIVT01004851001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01008090001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01008484001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01009032001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
GSVIVT01010006001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.09 Archaeplastida
GSVIVT01010086001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
GSVIVT01013126001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
GSVIVT01014770001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01015264001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01016800001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
GSVIVT01018577001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.09 Archaeplastida
GSVIVT01019410001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.06 Archaeplastida
GSVIVT01023531001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
GSVIVT01024353001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
GSVIVT01025269001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.11 Archaeplastida
GSVIVT01028235001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
GSVIVT01028328001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01031341001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01032088001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.07 Archaeplastida
GSVIVT01035177001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01035332001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
Gb_02422 No alias transcription factor (MYB) 0.09 Archaeplastida
Gb_13117 No alias transcription factor (MYB) 0.03 Archaeplastida
Gb_25814 No alias transcription factor (MYB) 0.07 Archaeplastida
Gb_29789 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os01g07450.1 No alias transcription factor (MYB) 0.04 Archaeplastida
LOC_Os01g36460.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os01g52410.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os01g65370.1 No alias transcription factor (MYB) 0.05 Archaeplastida
LOC_Os02g02370.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os02g46780.1 No alias transcription factor (MYB) 0.05 Archaeplastida
LOC_Os03g04900.1 No alias transcription factor (MYB) 0.04 Archaeplastida
LOC_Os03g18480.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os03g51110.1 No alias transcription factor (MYB) 0.09 Archaeplastida
LOC_Os04g42950.1 No alias transcription factor (MYB) 0.06 Archaeplastida
LOC_Os04g50770.1 No alias transcription factor (MYB) 0.06 Archaeplastida
LOC_Os05g04210.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os05g04820.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os05g46610.1 No alias transcription factor (MYB) 0.05 Archaeplastida
LOC_Os06g02250.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os07g43420.1 No alias transcription factor (MYB) 0.04 Archaeplastida
LOC_Os07g44090.3 No alias transcription factor (MYB) 0.05 Archaeplastida
LOC_Os08g05520.1 No alias transcription factor (MYB) 0.1 Archaeplastida
LOC_Os08g33660.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os08g37970.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os09g23620.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os11g03440.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os12g03150.1 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_10157944g0010 No alias transcription factor (MYB) 0.04 Archaeplastida
MA_10425867g0020 No alias transcription factor (MYB) 0.07 Archaeplastida
MA_10429682g0010 No alias transcription factor (MYB) 0.04 Archaeplastida
MA_10433651g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_10434028g0010 No alias transcription factor (MYB) 0.04 Archaeplastida
MA_117992g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_137453g0010 No alias transcription factor (MYB) 0.06 Archaeplastida
MA_17672g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_22140g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_230300g0010 No alias transcription factor (MYB) 0.06 Archaeplastida
MA_298677g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_31666g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_3665g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_492415g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_95339g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
Mp5g22280.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Pp3c15_1270V3.1 No alias myb domain protein 86 0.03 Archaeplastida
Pp3c17_7730V3.1 No alias myb domain protein 55 0.03 Archaeplastida
Pp3c1_42920V3.1 No alias myb domain protein 103 0.03 Archaeplastida
Pp3c1_4970V3.1 No alias myb domain protein 106 0.03 Archaeplastida
Pp3c7_23490V3.1 No alias myb domain protein 106 0.03 Archaeplastida
Pp3c9_10290V3.1 No alias myb domain protein 55 0.03 Archaeplastida
Smo6091 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
Smo84608 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
Smo90153 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
Solyc02g089190.2.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Solyc02g093740.3.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Solyc03g025870.3.1 No alias transcription factor (MYB) 0.06 Archaeplastida
Solyc04g056310.3.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Solyc04g074170.3.1 No alias transcription factor (MYB) 0.05 Archaeplastida
Solyc04g077260.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc05g051550.2.1 No alias transcription factor (MYB) 0.05 Archaeplastida
Solyc06g074910.3.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Solyc07g006750.3.1 No alias transcription factor (MYB) 0.07 Archaeplastida
Solyc07g054840.4.1 No alias transcription factor (MYB) 0.06 Archaeplastida
Solyc08g076700.1.1 No alias transcription factor (MYB) 0.05 Archaeplastida
Solyc08g076710.3.1 No alias transcription factor (MYB) 0.05 Archaeplastida
Solyc09g008250.4.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Solyc09g090790.3.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Solyc10g005240.3.1 No alias transcription factor (MYB) 0.09 Archaeplastida
Solyc10g005460.3.1 No alias transcription factor (MYB) 0.07 Archaeplastida
Solyc10g008700.3.1 No alias No annotation 0.04 Archaeplastida
Solyc12g049300.2.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e003407_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e005507_P001 No alias transcription factor (MYB) 0.06 Archaeplastida
Zm00001e005823_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e007085_P001 No alias transcription factor (MYB) 0.05 Archaeplastida
Zm00001e008489_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e010995_P001 No alias transcription factor (MYB) 0.05 Archaeplastida
Zm00001e011944_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e012960_P002 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e015884_P001 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e016583_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e016791_P001 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e017428_P003 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e018186_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e020044_P001 No alias transcription factor (MYB) 0.06 Archaeplastida
Zm00001e023100_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e023733_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e024322_P001 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e024682_P001 No alias transcription factor (MYB) 0.05 Archaeplastida
Zm00001e027531_P001 No alias transcription factor (MYB) 0.06 Archaeplastida
Zm00001e028135_P001 No alias transcription factor (MYB) 0.07 Archaeplastida
Zm00001e029816_P001 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e032298_P001 No alias transcription factor (MYB) 0.06 Archaeplastida
Zm00001e035025_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e039756_P002 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e040265_P001 No alias transcription factor (MYB) 0.08 Archaeplastida
Zm00001e040384_P001 No alias transcription factor (MYB) 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0010215 cellulose microfibril organization IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
BP GO:0030198 extracellular matrix organization IEP Neighborhood
CC GO:0031225 anchored component of membrane IEP Neighborhood
BP GO:0043062 extracellular structure organization IEP Neighborhood
InterPro domains Description Start Stop
IPR001005 SANT/Myb 85 128
IPR001005 SANT/Myb 32 79
No external refs found!