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  5. Solyc11g065880.2.1

Solyc11g065880.2.1


Description : mRNA-binding regulatory factor (RBP45/47)


Gene families : OG0000444 (Archaeplastida) Phylogenetic Tree(s): OG0000444_tree ,
OG_05_0000471 (LandPlants) Phylogenetic Tree(s): OG_05_0000471_tree ,
OG_06_0000318 (SeedPlants) Phylogenetic Tree(s): OG_06_0000318_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc11g065880.2.1
Cluster HCCA: Cluster_131

Target Alias Description ECC score Gene Family Method Actions
Cre16.g652900 No alias Polyadenylate-binding protein RBP45A OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01037634001 No alias Polyadenylate-binding protein RBP45 OS=Nicotiana plumbaginifolia 0.03 Archaeplastida
GSVIVT01037635001 No alias Polyadenylate-binding protein RBP45C OS=Arabidopsis thaliana 0.03 Archaeplastida
Gb_07135 No alias mRNA-binding regulatory factor (RBP45/47) 0.04 Archaeplastida
MA_10427383g0010 No alias Polyadenylate-binding protein RBP47B OS=Arabidopsis... 0.02 Archaeplastida
Pp3c12_10910V3.1 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.02 Archaeplastida
Pp3c12_10960V3.1 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.02 Archaeplastida
Pp3c4_13300V3.1 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.02 Archaeplastida
Smo232989 No alias Polyadenylate-binding protein RBP47B OS=Arabidopsis thaliana 0.01 Archaeplastida
Zm00001e010479_P003 No alias mRNA-binding regulatory factor (RBP45/47) 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000504 RRM_dom 111 180
IPR000504 RRM_dom 228 289
IPR000504 RRM_dom 19 88
No external refs found!