Solyc11g065980.3.1

Description : SSU processome assembly factor (IMP4)

Gene families : OG0006180 (Archaeplastida) Phylogenetic Tree(s): OG0006180_tree ,
OG_05_0111076 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0089066 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc11g065980.3.1
Cluster	HCCA: Cluster_202

Target	Alias	Description	ECC score	Gene Family Method	Actions
Pp3c25_4340V3.1	No alias	Ribosomal RNA processing Brix domain protein	0.03	Archaeplastida
Smo145922	No alias	Protein biosynthesis.cytosolic ribosome.small subunit...	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
No GO annotation available for this sequence

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Type	GO Term	Name	Evidence	Source
MF	GO:0004812	aminoacyl-tRNA ligase activity	IEP	Neighborhood
MF	GO:0005515	protein binding	IEP	Neighborhood
CC	GO:0005643	nuclear pore	IEP	Neighborhood
BP	GO:0006418	tRNA aminoacylation for protein translation	IEP	Neighborhood
MF	GO:0016875	ligase activity, forming carbon-oxygen bonds	IEP	Neighborhood
BP	GO:0043038	amino acid activation	IEP	Neighborhood
BP	GO:0043039	tRNA aminoacylation	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR007109	Brix	68	238

External Links

No external refs found!

Solyc11g065980.3.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation