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  5. Solyc11g066020.2.1

Solyc11g066020.2.1


Description : RING-HC-class E3 ligase


Gene families : OG0001840 (Archaeplastida) Phylogenetic Tree(s): OG0001840_tree ,
OG_05_0001934 (LandPlants) Phylogenetic Tree(s): OG_05_0001934_tree ,
OG_06_0004532 (SeedPlants) Phylogenetic Tree(s): OG_06_0004532_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc11g066020.2.1
Cluster HCCA: Cluster_244

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00181530 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.06 Archaeplastida
LOC_Os05g02130.1 No alias RING-HC-class E3 ligase 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Neighborhood
BP GO:0006887 exocytosis IEP Neighborhood
BP GO:0016192 vesicle-mediated transport IEP Neighborhood
BP GO:0032940 secretion by cell IEP Neighborhood
CC GO:0044448 cell cortex part IEP Neighborhood
BP GO:0046903 secretion IEP Neighborhood
CC GO:0099023 tethering complex IEP Neighborhood
InterPro domains Description Start Stop
IPR020683 Ankyrin_rpt-contain_dom 15 108
IPR020683 Ankyrin_rpt-contain_dom 110 184
No external refs found!