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  5. AMTR_s00032p00186620

AMTR_s00032p00186620 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00032.165

Description : Solute transport.carrier-mediated transport.MFS superfamily.OCT family.organic cation transporter (OCT-type)


Gene families : OG0001017 (Archaeplastida) Phylogenetic Tree(s): OG0001017_tree ,
OG_05_0000761 (LandPlants) Phylogenetic Tree(s): OG_05_0000761_tree ,
OG_06_0000885 (SeedPlants) Phylogenetic Tree(s): OG_06_0000885_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00032p00186620
Cluster HCCA: Cluster_216

Target Alias Description ECC score Gene Family Method Actions
AT1G73220 AtOCT1, 1-Oct organic cation/carnitine transporter1 0.03 Archaeplastida
MA_29857g0020 No alias organic cation transporter (OCT) 0.03 Archaeplastida
Solyc05g053860.4.1 No alias organic cation transporter (OCT) 0.03 Archaeplastida
Solyc12g017380.3.1 No alias organic cation transporter (OCT) 0.04 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0016021 integral component of membrane IEA Interproscan
MF GO:0022857 transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
CC GO:0009523 photosystem II IEP Neighborhood
CC GO:0009654 photosystem II oxygen evolving complex IEP Neighborhood
MF GO:0016160 amylase activity IEP Neighborhood
MF GO:0016161 beta-amylase activity IEP Neighborhood
MF GO:0016668 oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor IEP Neighborhood
CC GO:0019898 extrinsic component of membrane IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
MF GO:0047134 protein-disulfide reductase activity IEP Neighborhood
CC GO:1990204 oxidoreductase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR005828 MFS_sugar_transport-like 2 373
No external refs found!