Solyc11g069090.2.1


Description : ABC transporter F family member 1 OS=Arabidopsis thaliana (sp|q9fjh6|ab1f_arath : 976.0)


Gene families : OG0001462 (Archaeplastida) Phylogenetic Tree(s): OG0001462_tree ,
OG_05_0003606 (LandPlants) Phylogenetic Tree(s): OG_05_0003606_tree ,
OG_06_0004111 (SeedPlants) Phylogenetic Tree(s): OG_06_0004111_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc11g069090.2.1
Cluster HCCA: Cluster_185

Target Alias Description ECC score Gene Family Method Actions
Cre11.g467781 No alias ABC transporter F family member 1 OS=Arabidopsis thaliana 0.03 Archaeplastida
Gb_21382 No alias ABC transporter F family member 1 OS=Arabidopsis... 0.03 Archaeplastida
Pp3c1_33790V3.1 No alias ABC transporter family protein 0.04 Archaeplastida
Pp3c2_12550V3.1 No alias ABC transporter family protein 0.03 Archaeplastida
Pp3c5_11340V3.1 No alias ABC transporter family protein 0.03 Archaeplastida
Smo154355 No alias ABC transporter F family member 1 OS=Arabidopsis thaliana 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016887 ATPase activity IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP Neighborhood
MF GO:0005096 GTPase activator activity IEP Neighborhood
MF GO:0008047 enzyme activator activity IEP Neighborhood
MF GO:0008234 cysteine-type peptidase activity IEP Neighborhood
BP GO:0016579 protein deubiquitination IEP Neighborhood
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Neighborhood
MF GO:0019787 ubiquitin-like protein transferase activity IEP Neighborhood
MF GO:0030234 enzyme regulator activity IEP Neighborhood
MF GO:0030695 GTPase regulator activity IEP Neighborhood
MF GO:0031072 heat shock protein binding IEP Neighborhood
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEP Neighborhood
MF GO:0051082 unfolded protein binding IEP Neighborhood
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Neighborhood
MF GO:0061630 ubiquitin protein ligase activity IEP Neighborhood
MF GO:0061659 ubiquitin-like protein ligase activity IEP Neighborhood
BP GO:0070646 protein modification by small protein removal IEP Neighborhood
BP GO:0070647 protein modification by small protein conjugation or removal IEP Neighborhood
MF GO:0101005 ubiquitinyl hydrolase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like 402 533
IPR032781 ABC_tran_Xtn 286 358
IPR003439 ABC_transporter-like 93 247
No external refs found!