- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : component GCP6 of gamma-Tubulin ring complex (gamma-TuRC)
Gene families : OG0004962 (Archaeplastida) Phylogenetic Tree(s): OG0004962_tree ,
OG_05_0004968 (LandPlants) Phylogenetic Tree(s): OG_05_0004968_tree ,
OG_06_0006501 (SeedPlants) Phylogenetic Tree(s): OG_06_0006501_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Solyc11g071570.3.1 | |
| Cluster | HCCA: Cluster_35 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT3G43610 | No alias | Spc97 / Spc98 family of spindle pole body (SBP) component | 0.03 | Archaeplastida | |
| Cre02.g143151 | No alias | No description available | 0.03 | Archaeplastida | |
| GSVIVT01022379001 | No alias | Cytoskeleton.microtubular network.microtubule Tubulin... | 0.05 | Archaeplastida | |
| LOC_Os04g47912.1 | No alias | component GCP6 of gamma-Tubulin ring complex (gamma-TuRC) | 0.03 | Archaeplastida | |
| Pp3c11_24620V3.1 | No alias | Spc97 / Spc98 family of spindle pole body (SBP) component | 0.04 | Archaeplastida | |
| Zm00001e007229_P002 | No alias | component GCP6 of gamma-Tubulin ring complex (gamma-TuRC) | 0.04 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0043015 | gamma-tubulin binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000723 | telomere maintenance | IEP | Neighborhood |
| CC | GO:0000781 | chromosome, telomeric region | IEP | Neighborhood |
| CC | GO:0000784 | nuclear chromosome, telomeric region | IEP | Neighborhood |
| MF | GO:0003676 | nucleic acid binding | IEP | Neighborhood |
| MF | GO:0003697 | single-stranded DNA binding | IEP | Neighborhood |
| MF | GO:0003916 | DNA topoisomerase activity | IEP | Neighborhood |
| MF | GO:0003924 | GTPase activity | IEP | Neighborhood |
| MF | GO:0004809 | tRNA (guanine-N2-)-methyltransferase activity | IEP | Neighborhood |
| MF | GO:0005049 | nuclear export signal receptor activity | IEP | Neighborhood |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:0006259 | DNA metabolic process | IEP | Neighborhood |
| BP | GO:0006265 | DNA topological change | IEP | Neighborhood |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Neighborhood |
| BP | GO:0006996 | organelle organization | IEP | Neighborhood |
| MF | GO:0008170 | N-methyltransferase activity | IEP | Neighborhood |
| MF | GO:0008173 | RNA methyltransferase activity | IEP | Neighborhood |
| MF | GO:0008175 | tRNA methyltransferase activity | IEP | Neighborhood |
| MF | GO:0008536 | Ran GTPase binding | IEP | Neighborhood |
| BP | GO:0009262 | deoxyribonucleotide metabolic process | IEP | Neighborhood |
| BP | GO:0009263 | deoxyribonucleotide biosynthetic process | IEP | Neighborhood |
| BP | GO:0016043 | cellular component organization | IEP | Neighborhood |
| BP | GO:0016197 | endosomal transport | IEP | Neighborhood |
| MF | GO:0016423 | tRNA (guanine) methyltransferase activity | IEP | Neighborhood |
| BP | GO:0016482 | cytosolic transport | IEP | Neighborhood |
| MF | GO:0016853 | isomerase activity | IEP | Neighborhood |
| MF | GO:0017016 | Ras GTPase binding | IEP | Neighborhood |
| MF | GO:0031267 | small GTPase binding | IEP | Neighborhood |
| BP | GO:0032200 | telomere organization | IEP | Neighborhood |
| BP | GO:0042147 | retrograde transport, endosome to Golgi | IEP | Neighborhood |
| MF | GO:0042162 | telomeric DNA binding | IEP | Neighborhood |
| BP | GO:0042592 | homeostatic process | IEP | Neighborhood |
| MF | GO:0043047 | single-stranded telomeric DNA binding | IEP | Neighborhood |
| CC | GO:0044454 | nuclear chromosome part | IEP | Neighborhood |
| BP | GO:0046483 | heterocycle metabolic process | IEP | Neighborhood |
| BP | GO:0046907 | intracellular transport | IEP | Neighborhood |
| BP | GO:0051276 | chromosome organization | IEP | Neighborhood |
| BP | GO:0051641 | cellular localization | IEP | Neighborhood |
| BP | GO:0051649 | establishment of localization in cell | IEP | Neighborhood |
| BP | GO:0060249 | anatomical structure homeostasis | IEP | Neighborhood |
| BP | GO:0071103 | DNA conformation change | IEP | Neighborhood |
| BP | GO:0071840 | cellular component organization or biogenesis | IEP | Neighborhood |
| CC | GO:0098687 | chromosomal region | IEP | Neighborhood |
| MF | GO:0098847 | sequence-specific single stranded DNA binding | IEP | Neighborhood |
| MF | GO:0140104 | molecular carrier activity | IEP | Neighborhood |
| MF | GO:0140142 | nucleocytoplasmic carrier activity | IEP | Neighborhood |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Neighborhood |
No InterPro domains available for this sequence
| No external refs found! |