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  5. Solyc11g071770.1.1

Solyc11g071770.1.1


Description : Efl1 LSU processome elongation-factor-like regulatory GTPase


Gene families : OG0005668 (Archaeplastida) Phylogenetic Tree(s): OG0005668_tree ,
OG_05_0006564 (LandPlants) Phylogenetic Tree(s): OG_05_0006564_tree ,
OG_06_0008852 (SeedPlants) Phylogenetic Tree(s): OG_06_0008852_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc11g071770.1.1
Cluster HCCA: Cluster_263

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00150000 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 Archaeplastida
Cre13.g564950 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.01 Archaeplastida
Gb_39134 No alias Efl1 LSU processome elongation-factor-like regulatory GTPase 0.03 Archaeplastida
MA_10435902g0010 No alias Efl1 LSU processome elongation-factor-like regulatory GTPase 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP Neighborhood
MF GO:0003743 translation initiation factor activity IEP Neighborhood
MF GO:0004526 ribonuclease P activity IEP Neighborhood
MF GO:0004549 tRNA-specific ribonuclease activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Neighborhood
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Neighborhood
BP GO:0006413 translational initiation IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
BP GO:0006790 sulfur compound metabolic process IEP Neighborhood
BP GO:0006914 autophagy IEP Neighborhood
MF GO:0008234 cysteine-type peptidase activity IEP Neighborhood
BP GO:0009056 catabolic process IEP Neighborhood
BP GO:0016226 iron-sulfur cluster assembly IEP Neighborhood
BP GO:0016579 protein deubiquitination IEP Neighborhood
CC GO:0016592 mediator complex IEP Neighborhood
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Neighborhood
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Neighborhood
BP GO:0031163 metallo-sulfur cluster assembly IEP Neighborhood
MF GO:0031369 translation initiation factor binding IEP Neighborhood
MF GO:0031625 ubiquitin protein ligase binding IEP Neighborhood
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEP Neighborhood
BP GO:0042254 ribosome biogenesis IEP Neighborhood
MF GO:0042393 histone binding IEP Neighborhood
BP GO:0044085 cellular component biogenesis IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044248 cellular catabolic process IEP Neighborhood
MF GO:0044389 ubiquitin-like protein ligase binding IEP Neighborhood
BP GO:0061919 process utilizing autophagic mechanism IEP Neighborhood
BP GO:0070646 protein modification by small protein removal IEP Neighborhood
BP GO:0070647 protein modification by small protein conjugation or removal IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
MF GO:0101005 ubiquitinyl hydrolase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR000640 EFG_V-like 883 967
IPR000795 TF_GTP-bd_dom 8 349
IPR004161 EFTu-like_2 434 512
No external refs found!