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  5. Solyc11g071810.2.1

Solyc11g071810.2.1


Description : transcription factor (YABBY)


Gene families : OG0000890 (Archaeplastida) Phylogenetic Tree(s): OG0000890_tree ,
OG_05_0111111 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0089103 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc11g071810.2.1
Cluster HCCA: Cluster_241

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00165390 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.12 Archaeplastida
AT1G23420 INO Plant-specific transcription factor YABBY family protein 0.04 Archaeplastida
AT1G69180 CRC Plant-specific transcription factor YABBY family protein 0.02 Archaeplastida
AT2G26580 YAB5 plant-specific transcription factor YABBY family protein 0.02 Archaeplastida
AT2G45190 AFO, YAB1, FIL Plant-specific transcription factor YABBY family protein 0.03 Archaeplastida
GSVIVT01012246001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.04 Archaeplastida
GSVIVT01022586001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.05 Archaeplastida
Gb_22423 No alias transcription factor (YABBY) 0.04 Archaeplastida
LOC_Os07g06620.2 No alias transcription factor (YABBY) 0.02 Archaeplastida
LOC_Os10g36420.1 No alias transcription factor (YABBY) 0.02 Archaeplastida
LOC_Os12g42610.1 No alias transcription factor (YABBY) 0.03 Archaeplastida
MA_407206g0010 No alias transcription factor (YABBY) 0.04 Archaeplastida
Solyc01g010240.3.1 No alias transcription factor (YABBY) 0.05 Archaeplastida
Zm00001e000845_P005 No alias transcription factor (YABBY) 0.02 Archaeplastida
Zm00001e003268_P003 No alias transcription factor (YABBY) 0.02 Archaeplastida
Zm00001e004396_P001 No alias transcription factor (YABBY) 0.04 Archaeplastida
Zm00001e012387_P001 No alias transcription factor (YABBY) 0.06 Archaeplastida
Zm00001e012388_P001 No alias transcription factor (YABBY) 0.08 Archaeplastida
Zm00001e017951_P002 No alias transcription factor (YABBY) 0.02 Archaeplastida
Zm00001e032845_P002 No alias transcription factor (YABBY) 0.04 Archaeplastida
Zm00001e038717_P002 No alias transcription factor (YABBY) 0.05 Archaeplastida
Zm00001e041322_P001 No alias transcription factor (YABBY) 0.04 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0007275 multicellular organism development IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0004866 endopeptidase inhibitor activity IEP Neighborhood
MF GO:0005048 signal sequence binding IEP Neighborhood
BP GO:0006621 protein retention in ER lumen IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
MF GO:0030414 peptidase inhibitor activity IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
BP GO:0032507 maintenance of protein location in cell IEP Neighborhood
MF GO:0033218 amide binding IEP Neighborhood
BP GO:0035437 maintenance of protein localization in endoplasmic reticulum IEP Neighborhood
MF GO:0042277 peptide binding IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
BP GO:0045185 maintenance of protein location IEP Neighborhood
MF GO:0046923 ER retention sequence binding IEP Neighborhood
BP GO:0051235 maintenance of location IEP Neighborhood
BP GO:0051651 maintenance of location in cell IEP Neighborhood
MF GO:0061134 peptidase regulator activity IEP Neighborhood
MF GO:0061135 endopeptidase regulator activity IEP Neighborhood
BP GO:0065008 regulation of biological quality IEP Neighborhood
BP GO:0072595 maintenance of protein localization in organelle IEP Neighborhood
InterPro domains Description Start Stop
IPR006780 YABBY 12 171
No external refs found!