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  5. Solyc11g071840.2.1

Solyc11g071840.2.1


Description : no hits & (original description: none)


Gene families : OG0000181 (Archaeplastida) Phylogenetic Tree(s): OG0000181_tree ,
OG_05_0000202 (LandPlants) Phylogenetic Tree(s): OG_05_0000202_tree ,
OG_06_0004118 (SeedPlants) Phylogenetic Tree(s): OG_06_0004118_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc11g071840.2.1
Cluster HCCA: Cluster_206

Target Alias Description ECC score Gene Family Method Actions
AT1G17480 IQD7 IQ-domain 7 0.03 Archaeplastida
GSVIVT01037598001 No alias Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana 0.07 Archaeplastida
Gb_18106 No alias Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os01g09790.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os03g57330.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os06g06160.2 No alias Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os06g40850.1 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_10430537g0020 No alias Protein IQ-DOMAIN 14 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_40034g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_8080485g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_81306g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_9851g0010 No alias Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Mp3g23600.1 No alias Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Mp7g08970.1 No alias Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana... 0.05 Archaeplastida
Mp8g06010.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Pp3c14_22560V3.1 No alias IQ-domain 6 0.03 Archaeplastida
Pp3c19_11650V3.1 No alias IQ-domain 3 0.02 Archaeplastida
Pp3c1_38330V3.1 No alias IQ-domain 6 0.04 Archaeplastida
Pp3c26_2929V3.1 No alias IQ-domain 2 0.02 Archaeplastida
Pp3c4_23600V3.1 No alias IQ-domain 2 0.02 Archaeplastida
Pp3c4_3290V3.1 No alias IQ-domain 2 0.02 Archaeplastida
Smo441008 No alias Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana 0.03 Archaeplastida
Solyc08g062940.4.1 No alias Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Zm00001e005923_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e011903_P005 No alias no hits & (original description: none) 0.05 Archaeplastida
Zm00001e020006_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e031848_P002 No alias Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana... 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Neighborhood
BP GO:0009892 negative regulation of metabolic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0010629 negative regulation of gene expression IEP Neighborhood
MF GO:0016160 amylase activity IEP Neighborhood
MF GO:0016161 beta-amylase activity IEP Neighborhood
MF GO:0016409 palmitoyltransferase activity IEP Neighborhood
BP GO:0016458 gene silencing IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0031047 gene silencing by RNA IEP Neighborhood
BP GO:0048519 negative regulation of biological process IEP Neighborhood
MF GO:0050660 flavin adenine dinucleotide binding IEP Neighborhood
MF GO:0050662 coenzyme binding IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
MF GO:0071949 FAD binding IEP Neighborhood
InterPro domains Description Start Stop
IPR000048 IQ_motif_EF-hand-BS 101 119
No external refs found!