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  5. AMTR_s00032p00208090

AMTR_s00032p00208090 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00032.199

Description : Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.Cullin-based ubiquitylation complexes.SKP1-CUL1-FBX (SCF) E3 ligase complexes.F-BOX substrate adaptor components.UFO component


Gene families : OG0001709 (Archaeplastida) Phylogenetic Tree(s): OG0001709_tree ,
OG_05_0001097 (LandPlants) Phylogenetic Tree(s): OG_05_0001097_tree ,
OG_06_0007704 (SeedPlants) Phylogenetic Tree(s): OG_06_0007704_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00032p00208090
Cluster HCCA: Cluster_47

Target Alias Description ECC score Gene Family Method Actions
MA_10431723g0010 No alias F-box only protein 6 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Pp3c20_3080V3.1 No alias Galactose oxidase/kelch repeat superfamily protein 0.03 Archaeplastida
Smo407049 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006508 proteolysis IEP Neighborhood
BP GO:0007264 small GTPase mediated signal transduction IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0008234 cysteine-type peptidase activity IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
InterPro domains Description Start Stop
IPR001810 F-box_dom 44 83
No external refs found!