AT1G04600 (XIA, ATXIA)

Aliases : XIA, ATXIA

Description : myosin XI A

Gene families : OG0000144 (Archaeplastida) Phylogenetic Tree(s): OG0000144_tree ,
OG_05_0026712 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0025133 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G04600
Cluster	HCCA: Cluster_57

Target	Alias	Description	ECC score	Gene Family Method
Cpa\|evm.model.tig00020614.58	No alias	Myosin-8 OS=Arabidopsis thaliana	0.03	Archaeplastida
GSVIVT01005233001	No alias	Myosin-6 OS=Arabidopsis thaliana	0.05	Archaeplastida
GSVIVT01028990001	No alias	Cytoskeleton.microfilament network.myosin...	0.04	Archaeplastida
LOC_Os06g29350.1	No alias	class XI myosin microfilament-based motor protein	0.02	Archaeplastida
Pp3c15_24240V3.1	No alias	Myosin family protein with Dil domain	0.02	Archaeplastida
Smo174533	No alias	Cytoskeleton.microfilament network.myosin...	0.02	Archaeplastida
Smo230820	No alias	Cytoskeleton.microfilament network.myosin...	0.03	Archaeplastida
Solyc09g091080.4.1	No alias	no hits & (original description: none)	0.03	Archaeplastida
Solyc11g006220.2.1	No alias	class XI myosin microfilament-based motor protein	0.03	Archaeplastida
Zm00001e006446_P002	No alias	class XI myosin microfilament-based motor protein	0.02	Archaeplastida
Zm00001e012626_P001	No alias	class VIII myosin microfilament-based motor protein	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003774	motor activity	ISS	Interproscan
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005794	Golgi apparatus	ISM	Interproscan
BP	GO:0006928	movement of cell or subcellular component	None	Extended
BP	GO:0006996	organelle organization	None	Extended
BP	GO:0007010	cytoskeleton organization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
CC	GO:0016459	myosin complex	ISS	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0017111	nucleoside-triphosphatase activity	None	Extended
BP	GO:0030029	actin filament-based process	None	Extended
BP	GO:0030036	actin cytoskeleton organization	RCA	Interproscan
BP	GO:0030048	actin filament-based movement	RCA	Interproscan
BP	GO:0030048	actin filament-based movement	TAS	Interproscan
CC	GO:0032991	protein-containing complex	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0044422	organelle part	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044430	cytoskeletal part	None	Extended
CC	GO:0044444	cytoplasmic part	None	Extended
CC	GO:0044446	intracellular organelle part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051640	organelle localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051645	Golgi localization	RCA	Interproscan
BP	GO:0051646	mitochondrion localization	RCA	Interproscan
BP	GO:0060151	peroxisome localization	RCA	Interproscan
BP	GO:0071840	cellular component organization or biogenesis	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0002238	response to molecule of fungal origin	IEP	Neighborhood
BP	GO:0006259	DNA metabolic process	IEP	Neighborhood
BP	GO:0006260	DNA replication	IEP	Neighborhood
BP	GO:0006261	DNA-dependent DNA replication	IEP	Neighborhood
BP	GO:0006935	chemotaxis	IEP	Neighborhood
BP	GO:0007276	gamete generation	IEP	Neighborhood
MF	GO:0008187	poly-pyrimidine tract binding	IEP	Neighborhood
MF	GO:0008266	poly(U) RNA binding	IEP	Neighborhood
BP	GO:0009566	fertilization	IEP	Neighborhood
BP	GO:0009567	double fertilization forming a zygote and endosperm	IEP	Neighborhood
BP	GO:0010183	pollen tube guidance	IEP	Neighborhood
BP	GO:0010492	maintenance of shoot apical meristem identity	IEP	Neighborhood
BP	GO:0032504	multicellular organism reproduction	IEP	Neighborhood
BP	GO:0032875	regulation of DNA endoreduplication	IEP	Neighborhood
BP	GO:0032877	positive regulation of DNA endoreduplication	IEP	Neighborhood
MF	GO:0035197	siRNA binding	IEP	Neighborhood
BP	GO:0040011	locomotion	IEP	Neighborhood
BP	GO:0042330	taxis	IEP	Neighborhood
BP	GO:0045740	positive regulation of DNA replication	IEP	Neighborhood
BP	GO:0045787	positive regulation of cell cycle	IEP	Neighborhood
BP	GO:0048235	pollen sperm cell differentiation	IEP	Neighborhood
BP	GO:0050918	positive chemotaxis	IEP	Neighborhood
BP	GO:0051052	regulation of DNA metabolic process	IEP	Neighborhood
BP	GO:0051054	positive regulation of DNA metabolic process	IEP	Neighborhood
MF	GO:0061980	regulatory RNA binding	IEP	Neighborhood
BP	GO:0090068	positive regulation of cell cycle process	IEP	Neighborhood
BP	GO:0090329	regulation of DNA-dependent DNA replication	IEP	Neighborhood
BP	GO:2000105	positive regulation of DNA-dependent DNA replication	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR002710	Dilute_dom	1553	1656
IPR001609	Myosin_head_motor_dom	63	719
IPR004009	Myosin_N	10	47
IPR000048	IQ_motif_EF-hand-BS	831	850
IPR000048	IQ_motif_EF-hand-BS	855	874

External Links

No external refs found!

AT1G04600 (XIA, ATXIA)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation