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  5. Solyc11g072270.3.1

Solyc11g072270.3.1


Description : Probable calcium-binding protein CML13 OS=Arabidopsis thaliana (sp|q94az4|cml13_arath : 249.0)


Gene families : OG0000031 (Archaeplastida) Phylogenetic Tree(s): OG0000031_tree ,
OG_05_0009399 (LandPlants) Phylogenetic Tree(s): OG_05_0009399_tree ,
OG_06_0006499 (SeedPlants) Phylogenetic Tree(s): OG_06_0006499_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc11g072270.3.1
Cluster HCCA: Cluster_21

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00095p00113890 evm_27.TU.AmTr_v1... Calmodulin OS=Medicago sativa 0.03 Archaeplastida
AT1G62820 No alias Calcium-binding EF-hand family protein 0.07 Archaeplastida
Cpa|evm.model.tig00021435.46 No alias No description available 0.02 Archaeplastida
Cpa|evm.model.tig00021435.47 No alias Calmodulin OS=Mougeotia scalaris 0.02 Archaeplastida
Cre03.g150300 No alias Calmodulin-3 OS=Oryza sativa subsp. japonica 0.01 Archaeplastida
Cre03.g178150 No alias Calmodulin OS=Chlamydomonas reinhardtii 0.02 Archaeplastida
Cre06.g283550 No alias Caltractin OS=Scherffelia dubia 0.02 Archaeplastida
Cre11.g468450 No alias RNA processing.messenger ribonucleoprotein particle... 0.05 Archaeplastida
LOC_Os01g17190.1 No alias Calmodulin-related protein OS=Petunia hybrida... 0.06 Archaeplastida
MA_10429336g0010 No alias Calmodulin-related protein OS=Petunia hybrida... 0.06 Archaeplastida
MA_616616g0010 No alias Probable calcium-binding protein CML25 OS=Arabidopsis... 0.03 Archaeplastida
MA_66144g0010 No alias Calmodulin-related protein OS=Petunia hybrida... 0.06 Archaeplastida
Pp3c3_34260V3.1 No alias centrin2 0.03 Archaeplastida
Pp3c6_23740V3.1 No alias calmodulin like 23 0.02 Archaeplastida
Smo141966 No alias Calmodulin-1 OS=Oryza sativa subsp. indica 0.07 Archaeplastida
Smo83841 No alias Calmodulin-5/6/7/8 OS=Solanum tuberosum 0.04 Archaeplastida
Zm00001e027331_P001 No alias Calmodulin-related protein OS=Petunia hybrida... 0.04 Archaeplastida
Zm00001e038302_P001 No alias Calmodulin-related protein OS=Petunia hybrida... 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Neighborhood
MF GO:0005215 transporter activity IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005743 mitochondrial inner membrane IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006811 ion transport IEP Neighborhood
BP GO:0006812 cation transport IEP Neighborhood
BP GO:0006888 ER to Golgi vesicle-mediated transport IEP Neighborhood
CC GO:0008250 oligosaccharyltransferase complex IEP Neighborhood
MF GO:0008324 cation transmembrane transporter activity IEP Neighborhood
MF GO:0015075 ion transmembrane transporter activity IEP Neighborhood
MF GO:0015077 monovalent inorganic cation transmembrane transporter activity IEP Neighborhood
MF GO:0015078 proton transmembrane transporter activity IEP Neighborhood
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Neighborhood
BP GO:0015672 monovalent inorganic cation transport IEP Neighborhood
BP GO:0016192 vesicle-mediated transport IEP Neighborhood
MF GO:0016859 cis-trans isomerase activity IEP Neighborhood
CC GO:0019866 organelle inner membrane IEP Neighborhood
MF GO:0022857 transmembrane transporter activity IEP Neighborhood
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Neighborhood
CC GO:0030008 TRAPP complex IEP Neighborhood
CC GO:0031090 organelle membrane IEP Neighborhood
CC GO:0031966 mitochondrial membrane IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP Neighborhood
BP GO:0034220 ion transmembrane transport IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
CC GO:0044429 mitochondrial part IEP Neighborhood
CC GO:0044432 endoplasmic reticulum part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
CC GO:0044455 mitochondrial membrane part IEP Neighborhood
BP GO:0048193 Golgi vesicle transport IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood
CC GO:0061617 MICOS complex IEP Neighborhood
BP GO:0098655 cation transmembrane transport IEP Neighborhood
BP GO:0098660 inorganic ion transmembrane transport IEP Neighborhood
BP GO:0098662 inorganic cation transmembrane transport IEP Neighborhood
CC GO:0098796 membrane protein complex IEP Neighborhood
CC GO:0098798 mitochondrial protein complex IEP Neighborhood
CC GO:0098800 inner mitochondrial membrane protein complex IEP Neighborhood
CC GO:0099023 tethering complex IEP Neighborhood
BP GO:1902600 proton transmembrane transport IEP Neighborhood
CC GO:1990234 transferase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 13 41
IPR002048 EF_hand_dom 82 144
No external refs found!