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  5. Solyc11g072470.3.1

Solyc11g072470.3.1


Description : transcription factor (AS2/LOB)


Gene families : OG0000101 (Archaeplastida) Phylogenetic Tree(s): OG0000101_tree ,
OG_05_0000037 (LandPlants) Phylogenetic Tree(s): OG_05_0000037_tree ,
OG_06_0000043 (SeedPlants) Phylogenetic Tree(s): OG_06_0000043_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc11g072470.3.1
Cluster HCCA: Cluster_230

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00076p00127530 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AS2/LOB... 0.05 Archaeplastida
AMTR_s00169p00042500 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AS2/LOB... 0.02 Archaeplastida
AT1G07900 LBD1 LOB domain-containing protein 1 0.06 Archaeplastida
AT1G16530 LBD3, ASL9 ASYMMETRIC LEAVES 2-like 9 0.03 Archaeplastida
AT2G28500 LBD11 LOB domain-containing protein 11 0.05 Archaeplastida
AT2G30130 LBD12, ASL5, PCK1 Lateral organ boundaries (LOB) domain family protein 0.04 Archaeplastida
AT2G30340 LBD13 LOB domain-containing protein 13 0.05 Archaeplastida
AT2G40470 LBD15, ASL11 LOB domain-containing protein 15 0.03 Archaeplastida
GSVIVT01016334001 No alias RNA biosynthesis.transcriptional activation.AS2/LOB... 0.04 Archaeplastida
GSVIVT01016335001 No alias RNA biosynthesis.transcriptional activation.AS2/LOB... 0.03 Archaeplastida
GSVIVT01024662001 No alias RNA biosynthesis.transcriptional activation.AS2/LOB... 0.04 Archaeplastida
GSVIVT01025128001 No alias RNA biosynthesis.transcriptional activation.AS2/LOB... 0.04 Archaeplastida
GSVIVT01032714001 No alias RNA biosynthesis.transcriptional activation.AS2/LOB... 0.03 Archaeplastida
Gb_08465 No alias transcription factor (AS2/LOB) 0.04 Archaeplastida
Gb_16914 No alias transcription factor (AS2/LOB) 0.02 Archaeplastida
Gb_19720 No alias transcription factor (AS2/LOB) 0.02 Archaeplastida
Gb_22180 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida
Gb_29853 No alias transcription factor (AS2/LOB) 0.02 Archaeplastida
LOC_Os01g07480.2 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida
LOC_Os05g27980.1 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida
MA_113501g0010 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida
MA_290245g0010 No alias transcription factor (AS2/LOB) 0.06 Archaeplastida
MA_445236g0010 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida
MA_88711g0010 No alias transcription factor (AS2/LOB) 0.02 Archaeplastida
MA_9839150g0010 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida
Mp5g17820.1 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida
Pp3c23_14630V3.1 No alias LOB domain-containing protein 13 0.02 Archaeplastida
Solyc02g065150.2.1 No alias transcription factor (AS2/LOB) 0.02 Archaeplastida
Solyc06g050430.3.1 No alias transcription factor (AS2/LOB) 0.02 Archaeplastida
Solyc06g082310.3.1 No alias transcription factor (AS2/LOB) 0.06 Archaeplastida
Solyc06g082430.2.1 No alias transcription factor (AS2/LOB) 0.05 Archaeplastida
Zm00001e026736_P001 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida
Zm00001e031510_P001 No alias transcription factor (AS2/LOB) 0.04 Archaeplastida
Zm00001e038429_P001 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001101 response to acid chemical IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003857 3-hydroxyacyl-CoA dehydrogenase activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004556 alpha-amylase activity IEP Neighborhood
MF GO:0005102 signaling receptor binding IEP Neighborhood
CC GO:0005576 extracellular region IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0007034 vacuolar transport IEP Neighborhood
MF GO:0008083 growth factor activity IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
BP GO:0008283 cell proliferation IEP Neighborhood
BP GO:0009415 response to water IEP Neighborhood
BP GO:0009628 response to abiotic stimulus IEP Neighborhood
BP GO:0010035 response to inorganic substance IEP Neighborhood
MF GO:0016160 amylase activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Neighborhood
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Neighborhood
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Neighborhood
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0019842 vitamin binding IEP Neighborhood
CC GO:0030118 clathrin coat IEP Neighborhood
CC GO:0030120 vesicle coat IEP Neighborhood
CC GO:0030125 clathrin vesicle coat IEP Neighborhood
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP Neighborhood
CC GO:0030132 clathrin coat of coated pit IEP Neighborhood
MF GO:0030170 pyridoxal phosphate binding IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
MF GO:0030545 receptor regulator activity IEP Neighborhood
MF GO:0033743 peptide-methionine (R)-S-oxide reductase activity IEP Neighborhood
CC GO:0044431 Golgi apparatus part IEP Neighborhood
CC GO:0044433 cytoplasmic vesicle part IEP Neighborhood
CC GO:0044459 plasma membrane part IEP Neighborhood
MF GO:0048018 receptor ligand activity IEP Neighborhood
CC GO:0048046 apoplast IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
MF GO:0070279 vitamin B6 binding IEP Neighborhood
CC GO:0098797 plasma membrane protein complex IEP Neighborhood
BP GO:1901700 response to oxygen-containing compound IEP Neighborhood
InterPro domains Description Start Stop
IPR004883 LOB 36 133
No external refs found!