Solyc11g072500.2.1

Description : transcription factor (DOF)

Gene families : OG0000060 (Archaeplastida) Phylogenetic Tree(s): OG0000060_tree ,
OG_05_0000025 (LandPlants) Phylogenetic Tree(s): OG_05_0000025_tree ,
OG_06_0000055 (SeedPlants) Phylogenetic Tree(s): OG_06_0000055_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc11g072500.2.1
Cluster	HCCA: Cluster_92

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00059p00213350	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.C2C2...	0.03	Archaeplastida
AT2G34140	No alias	Dof-type zinc finger DNA-binding family protein	0.03	Archaeplastida
AT2G46590	DAG2	Dof-type zinc finger DNA-binding family protein	0.04	Archaeplastida
AT3G55370	OBP3	OBF-binding protein 3	0.08	Archaeplastida
AT3G61850	DAG1	Dof-type zinc finger DNA-binding family protein	0.06	Archaeplastida
AT4G24060	No alias	Dof-type zinc finger DNA-binding family protein	0.04	Archaeplastida
AT5G02460	No alias	Dof-type zinc finger DNA-binding family protein	0.04	Archaeplastida
AT5G62940	HCA2, DOF5.6	Dof-type zinc finger DNA-binding family protein	0.05	Archaeplastida
AT5G65590	No alias	Dof-type zinc finger DNA-binding family protein	0.02	Archaeplastida
GSVIVT01016538001	No alias	RNA biosynthesis.transcriptional activation.C2C2...	0.03	Archaeplastida
GSVIVT01021086001	No alias	RNA biosynthesis.transcriptional activation.C2C2...	0.04	Archaeplastida
GSVIVT01025119001	No alias	RNA biosynthesis.transcriptional activation.C2C2...	0.07	Archaeplastida
Gb_12877	No alias	transcription factor (DOF)	0.04	Archaeplastida
LOC_Os01g48290.1	No alias	transcription factor (DOF)	0.04	Archaeplastida
LOC_Os02g45200.1	No alias	transcription factor (DOF)	0.03	Archaeplastida
LOC_Os02g49440.1	No alias	transcription factor (DOF)	0.04	Archaeplastida
LOC_Os03g16850.1	No alias	transcription factor (DOF)	0.04	Archaeplastida
LOC_Os03g55610.1	No alias	transcription factor (DOF)	0.03	Archaeplastida
LOC_Os03g60630.1	No alias	transcription factor (DOF)	0.14	Archaeplastida
LOC_Os04g47990.1	No alias	transcription factor (DOF)	0.04	Archaeplastida
LOC_Os05g02150.1	No alias	transcription factor (DOF)	0.05	Archaeplastida
LOC_Os07g32510.1	No alias	transcription factor (DOF)	0.06	Archaeplastida
LOC_Os08g38220.1	No alias	transcription factor (DOF)	0.03	Archaeplastida
LOC_Os09g29960.1	No alias	transcription factor (DOF)	0.04	Archaeplastida
LOC_Os10g26620.1	No alias	transcription factor (DOF)	0.04	Archaeplastida
LOC_Os12g38200.1	No alias	transcription factor (DOF)	0.06	Archaeplastida
Mp1g18540.1	No alias	no hits & (original description: none)	0.02	Archaeplastida
Mp2g20790.1	No alias	transcription factor (DOF)	0.02	Archaeplastida
Pp3c13_2000V3.1	No alias	cycling DOF factor 3	0.02	Archaeplastida
Pp3c22_5870V3.1	No alias	TARGET OF MONOPTEROS 6	0.04	Archaeplastida
Pp3c4_850V3.1	No alias	cycling DOF factor 3	0.03	Archaeplastida
Pp3c9_4910V3.1	No alias	cycling DOF factor 2	0.02	Archaeplastida
Solyc06g076030.3.1	No alias	transcription factor (DOF)	0.05	Archaeplastida
Solyc10g009360.4.1	No alias	transcription factor (DOF)	0.04	Archaeplastida
Zm00001e002951_P002	No alias	transcription factor (DOF)	0.04	Archaeplastida
Zm00001e005785_P001	No alias	transcription factor (DOF)	0.05	Archaeplastida
Zm00001e006190_P001	No alias	transcription factor (DOF)	0.06	Archaeplastida
Zm00001e006527_P001	No alias	transcription factor (DOF)	0.03	Archaeplastida
Zm00001e007228_P002	No alias	transcription factor (DOF)	0.03	Archaeplastida
Zm00001e010022_P001	No alias	transcription factor (DOF)	0.05	Archaeplastida
Zm00001e011750_P002	No alias	transcription factor (DOF)	0.06	Archaeplastida
Zm00001e015414_P004	No alias	transcription factor (DOF)	0.06	Archaeplastida
Zm00001e015597_P001	No alias	transcription factor (DOF)	0.06	Archaeplastida
Zm00001e018163_P001	No alias	transcription factor (DOF)	0.08	Archaeplastida
Zm00001e023218_P004	No alias	transcription factor (DOF)	0.07	Archaeplastida
Zm00001e023334_P001	No alias	transcription factor (DOF)	0.05	Archaeplastida
Zm00001e027634_P002	No alias	transcription factor (DOF)	0.05	Archaeplastida
Zm00001e029641_P001	No alias	transcription factor (DOF)	0.04	Archaeplastida
Zm00001e035074_P001	No alias	transcription factor (DOF)	0.05	Archaeplastida
Zm00001e038479_P002	No alias	transcription factor (DOF)	0.04	Archaeplastida
Zm00001e041444_P001	No alias	transcription factor (DOF)	0.04	Archaeplastida
Zm00001e041944_P001	No alias	transcription factor (DOF)	0.12	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004672	protein kinase activity	IEP	Neighborhood
BP	GO:0006468	protein phosphorylation	IEP	Neighborhood
BP	GO:0016310	phosphorylation	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR003851	Znf_Dof	40	96

External Links

No external refs found!

Solyc11g072500.2.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation