1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc11g072770.2.1

Solyc11g072770.2.1


Description : transcription factor (WOX)


Gene families : OG0000425 (Archaeplastida) Phylogenetic Tree(s): OG0000425_tree ,
OG_05_0000212 (LandPlants) Phylogenetic Tree(s): OG_05_0000212_tree ,
OG_06_0000309 (SeedPlants) Phylogenetic Tree(s): OG_06_0000309_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc11g072770.2.1
Cluster HCCA: Cluster_241

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00122680 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.HB... 0.03 Archaeplastida
AMTR_s00012p00149750 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.HB... 0.02 Archaeplastida
AMTR_s00021p00189010 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.HB... 0.03 Archaeplastida
AMTR_s00029p00225270 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.HB... 0.06 Archaeplastida
AMTR_s00051p00020930 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.HB... 0.06 Archaeplastida
AT1G46480 WOX4 WUSCHEL related homeobox 4 0.06 Archaeplastida
AT2G01500 PFS2, HOS9, WOX6 Homeodomain-like superfamily protein 0.03 Archaeplastida
AT2G28610 WOX3, PRS1, PRS Homeodomain-like superfamily protein 0.08 Archaeplastida
AT2G33880 STIP, HB-3, WOX9 homeobox-3 0.06 Archaeplastida
AT3G11260 WOX5 WUSCHEL related homeobox 5 0.03 Archaeplastida
AT5G46010 No alias Homeodomain-like superfamily protein 0.04 Archaeplastida
GSVIVT01009453001 No alias RNA biosynthesis.transcriptional activation.HB... 0.03 Archaeplastida
GSVIVT01016360001 No alias RNA biosynthesis.transcriptional activation.HB... 0.03 Archaeplastida
GSVIVT01018787001 No alias RNA biosynthesis.transcriptional activation.HB... 0.02 Archaeplastida
GSVIVT01021144001 No alias RNA biosynthesis.transcriptional activation.HB... 0.03 Archaeplastida
GSVIVT01029942001 No alias RNA biosynthesis.transcriptional activation.HB... 0.02 Archaeplastida
Gb_01484 No alias transcription factor (WOX) 0.06 Archaeplastida
Gb_12294 No alias transcription factor (WOX) 0.03 Archaeplastida
Gb_27283 No alias transcription factor (WOX) 0.03 Archaeplastida
LOC_Os01g62310.1 No alias transcription factor (WOX) 0.02 Archaeplastida
LOC_Os03g20910.1 No alias transcription factor (WOX) 0.03 Archaeplastida
LOC_Os04g56780.1 No alias transcription factor (WOX) 0.06 Archaeplastida
LOC_Os05g48990.1 No alias transcription factor (WOX) 0.03 Archaeplastida
LOC_Os07g48560.1 No alias transcription factor (WOX) 0.06 Archaeplastida
LOC_Os08g14400.1 No alias transcription factor (WOX) 0.05 Archaeplastida
MA_8832398g0010 No alias transcription factor (WOX) 0.03 Archaeplastida
Zm00001e006644_P002 No alias transcription factor (WOX) 0.03 Archaeplastida
Zm00001e009121_P001 No alias transcription factor (WOX) 0.05 Archaeplastida
Zm00001e024169_P001 No alias transcription factor (WOX) 0.05 Archaeplastida
Zm00001e029534_P001 No alias transcription factor (WOX) 0.04 Archaeplastida
Zm00001e032433_P003 No alias transcription factor (WOX) 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0007275 multicellular organism development IEP Neighborhood
BP GO:0032501 multicellular organismal process IEP Neighborhood
BP GO:0032502 developmental process IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
BP GO:0048856 anatomical structure development IEP Neighborhood
InterPro domains Description Start Stop
IPR001356 Homeobox_dom 3 63
No external refs found!