Solyc12g005070.2.1

Description : CASP-like protein 2D1 OS=Vitis vinifera (sp|a7p0p3|cspl3_vitvi : 216.0)

Gene families : OG0004217 (Archaeplastida) Phylogenetic Tree(s): OG0004217_tree ,
OG_05_0002923 (LandPlants) Phylogenetic Tree(s): OG_05_0002923_tree ,
OG_06_0012843 (SeedPlants) Phylogenetic Tree(s): OG_06_0012843_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc12g005070.2.1
Cluster	HCCA: Cluster_55

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00037p00155660	evm_27.TU.AmTr_v1...	CASP-like protein 2D1 OS=Vitis vinifera	0.06	Archaeplastida
AT1G17200	No alias	Uncharacterised protein family (UPF0497)	0.04	Archaeplastida
AT3G14380	No alias	Uncharacterised protein family (UPF0497)	0.02	Archaeplastida
AT5G54980	No alias	Uncharacterised protein family (UPF0497)	0.06	Archaeplastida
Gb_02196	No alias	CASP-like protein 2A3 OS=Picea sitchensis...	0.02	Archaeplastida
LOC_Os02g12760.1	No alias	CASP-like protein 2D1 OS=Oryza sativa subsp. japonica...	0.02	Archaeplastida
Zm00001e014468_P001	No alias	CASP-like protein 2D1 OS=Zea mays (sp\|b6tuw9\|csplc_maize : 245.0)	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
No GO annotation available for this sequence

Type	GO Term	Name	Evidence	Source
BP	GO:0006508	proteolysis	IEP	Neighborhood
BP	GO:0008033	tRNA processing	IEP	Neighborhood
MF	GO:0008233	peptidase activity	IEP	Neighborhood
MF	GO:0008234	cysteine-type peptidase activity	IEP	Neighborhood
MF	GO:0015267	channel activity	IEP	Neighborhood
MF	GO:0022803	passive transmembrane transporter activity	IEP	Neighborhood
BP	GO:0034470	ncRNA processing	IEP	Neighborhood
MF	GO:0070011	peptidase activity, acting on L-amino acid peptides	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR006702	CASP_dom	4	141

External Links

No external refs found!