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  5. Solyc12g005640.2.1

Solyc12g005640.2.1


Description : transcription factor (MYB)


Gene families : OG0000002 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0111133 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0089125 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc12g005640.2.1
Cluster HCCA: Cluster_42

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00219710 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AMTR_s00003p00271440 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
AMTR_s00006p00225600 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
AMTR_s00024p00224850 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
AMTR_s00030p00146410 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.05 Archaeplastida
AMTR_s00039p00172240 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AMTR_s00044p00189590 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AMTR_s00091p00025820 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
AMTR_s00133p00071910 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
AMTR_s00139p00079430 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.06 Archaeplastida
AMTR_s00145p00098450 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AT1G22640 MYB3, ATMYB3 myb domain protein 3 0.03 Archaeplastida
AT1G35515 MYB8, HOS10 high response to osmotic stress 10 0.04 Archaeplastida
AT2G47190 MYB2, ATMYB2 myb domain protein 2 0.03 Archaeplastida
AT3G06490 BOS1, AtMYB108, MYB108 myb domain protein 108 0.03 Archaeplastida
AT3G23250 ATMYB15, ATY19, MYB15 myb domain protein 15 0.04 Archaeplastida
AT3G24310 MYB305, ATMYB71 myb domain protein 305 0.03 Archaeplastida
AT3G27810 ATMYB21, MYB21, ATMYB3 myb domain protein 21 0.02 Archaeplastida
AT3G28910 MYB30, ATMYB30 myb domain protein 30 0.03 Archaeplastida
AT3G30210 MYB121, ATMYB121 myb domain protein 121 0.03 Archaeplastida
AT3G49690 MYB84, RAX3, ATMYB84 myb domain protein 84 0.02 Archaeplastida
AT4G05100 AtMYB74, MYB74 myb domain protein 74 0.04 Archaeplastida
AT4G09460 MYB6, AtMYB6 myb domain protein 6 0.03 Archaeplastida
AT4G21440 ATMYB102, ATM4, MYB102 MYB-like 102 0.03 Archaeplastida
AT4G34990 MYB32, AtMYB32 myb domain protein 32 0.04 Archaeplastida
AT4G37260 MYB73, ATMYB73 myb domain protein 73 0.03 Archaeplastida
AT5G02320 ATMYB3R5, MYB3R-5 myb domain protein 3r-5 0.03 Archaeplastida
AT5G17800 MYB56, AtMYB56 myb domain protein 56 0.04 Archaeplastida
AT5G40330 ATMYBRTF, ATMYB23, MYB23 myb domain protein 23 0.02 Archaeplastida
AT5G40350 MYB24, AtMYB24 myb domain protein 24 0.02 Archaeplastida
AT5G40360 MYB115, AtMYB115 myb domain protein 115 0.02 Archaeplastida
AT5G49330 PFG3, ATMYB111, MYB111 myb domain protein 111 0.07 Archaeplastida
AT5G62470 MYBCOV1, MYB96, ATMYB96 myb domain protein 96 0.03 Archaeplastida
AT5G67300 MYBR1, MYB44,... myb domain protein r1 0.08 Archaeplastida
Cpa|evm.model.tig00021038.78 No alias RNA biosynthesis.transcriptional activation.MYB... 0.01 Archaeplastida
Cre01.g034350 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
Cre07.g345350 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01000449001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01000450001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.05 Archaeplastida
GSVIVT01004851001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01008090001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01008303001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
GSVIVT01008484001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01009032001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01009280001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
GSVIVT01010086001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01013126001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01014770001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01015264001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01016768001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01017716001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.05 Archaeplastida
GSVIVT01024353001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01028171001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01034943001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01035177001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01035463001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
Gb_00379 No alias transcription factor (MYB) 0.05 Archaeplastida
Gb_02422 No alias transcription factor (MYB) 0.02 Archaeplastida
Gb_11232 No alias transcription factor (MYB) 0.03 Archaeplastida
Gb_13117 No alias transcription factor (MYB) 0.04 Archaeplastida
Gb_19333 No alias transcription factor (MYB) 0.03 Archaeplastida
Gb_22239 No alias transcription factor (MYB) 0.03 Archaeplastida
Gb_29789 No alias transcription factor (MYB) 0.03 Archaeplastida
Gb_34086 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os01g07450.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os01g09590.1 No alias transcription factor (MYB) 0.05 Archaeplastida
LOC_Os01g19330.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os01g45090.1 No alias transcription factor (MYB) 0.06 Archaeplastida
LOC_Os01g52410.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os01g59660.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os01g65370.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os02g02370.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os02g40530.1 No alias transcription factor (MYB) 0.06 Archaeplastida
LOC_Os02g41510.1 No alias transcription factor (MYB) 0.04 Archaeplastida
LOC_Os02g42850.2 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os02g54520.1 No alias transcription factor (MYB) 0.06 Archaeplastida
LOC_Os03g04900.1 No alias transcription factor (MYB) 0.04 Archaeplastida
LOC_Os03g20090.1 No alias transcription factor (MYB) 0.05 Archaeplastida
LOC_Os03g38210.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os04g38740.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os04g43680.1 No alias transcription factor (MYB) 0.04 Archaeplastida
LOC_Os04g50680.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os05g04210.1 No alias transcription factor (MYB) 0.04 Archaeplastida
LOC_Os05g48010.1 No alias transcription factor (MYB) 0.07 Archaeplastida
LOC_Os06g43090.1 No alias transcription factor (MYB) 0.04 Archaeplastida
LOC_Os07g37210.1 No alias transcription factor (MYB) 0.05 Archaeplastida
LOC_Os08g37970.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os09g01960.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os09g23620.1 No alias transcription factor (MYB) 0.05 Archaeplastida
LOC_Os09g26170.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os10g33810.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os10g35660.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os11g03440.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os11g47460.1 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_10217366g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_10225049g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_10430220g0010 No alias transcription factor (MYB) 0.05 Archaeplastida
MA_10433651g0010 No alias transcription factor (MYB) 0.04 Archaeplastida
MA_10434028g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_117992g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_1201g0010 No alias transcription factor (MYB) 0.06 Archaeplastida
MA_121533g0010 No alias transcription factor (MYB) 0.05 Archaeplastida
MA_1261g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_128871g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_137934g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_15502g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_15687g0010 No alias transcription factor (MYB) 0.05 Archaeplastida
MA_173523g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_17672g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_190973g0010 No alias transcription factor (MYB) 0.04 Archaeplastida
MA_246142g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_246817g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_278282g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_30848g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_316475g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_37256g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_446064g0010 No alias transcription factor (MYB) 0.04 Archaeplastida
MA_45091g0010 No alias transcription factor (MYB) 0.05 Archaeplastida
MA_460508g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_4783697g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_499305g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_52293g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_53644g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_6277697g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_6285g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_8206949g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_84507g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_89683g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_926162g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_95747g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_9818613g0010 No alias transcription factor (MYB) 0.04 Archaeplastida
Mp4g04750.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Mp4g04760.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Mp5g14610.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Pp3c16_9970V3.1 No alias myb domain protein 106 0.02 Archaeplastida
Pp3c17_7730V3.1 No alias myb domain protein 55 0.02 Archaeplastida
Pp3c1_1650V3.1 No alias myb domain protein 105 0.02 Archaeplastida
Pp3c1_21610V3.1 No alias myb domain protein 103 0.07 Archaeplastida
Pp3c25_3170V3.1 No alias myb domain protein 16 0.02 Archaeplastida
Pp3c26_1390V3.1 No alias myb domain protein 55 0.02 Archaeplastida
Pp3c2_34670V3.1 No alias myb domain protein 105 0.02 Archaeplastida
Pp3c6_24650V3.1 No alias myb domain protein 109 0.02 Archaeplastida
Smo99462 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
Solyc01g057910.3.1 No alias transcription factor (MYB) 0.05 Archaeplastida
Solyc01g111500.3.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Solyc02g079280.3.1 No alias transcription factor (MYB) 0.05 Archaeplastida
Solyc02g086690.3.1 No alias transcription factor (MYB) 0.06 Archaeplastida
Solyc02g089190.2.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Solyc04g077260.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc05g053330.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc07g054840.4.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Solyc09g011780.3.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc09g090790.3.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Solyc10g008700.3.1 No alias No annotation 0.04 Archaeplastida
Solyc10g055410.2.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Solyc10g081490.2.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Solyc12g049350.2.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e001492_P001 No alias transcription factor (MYB) 0.07 Archaeplastida
Zm00001e004568_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e007422_P001 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e010995_P001 No alias transcription factor (MYB) 0.07 Archaeplastida
Zm00001e012681_P001 No alias transcription factor (MYB) 0.05 Archaeplastida
Zm00001e015235_P001 No alias transcription factor (MYB) 0.05 Archaeplastida
Zm00001e016072_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e017470_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e017496_P001 No alias transcription factor (MYB) 0.06 Archaeplastida
Zm00001e018391_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e020004_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e020140_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e020993_P002 No alias transcription factor (MYB) 0.05 Archaeplastida
Zm00001e025724_P001 No alias transcription factor (MYB) 0.05 Archaeplastida
Zm00001e025867_P001 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e026426_P001 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e027003_P001 No alias transcription factor (MYB) 0.05 Archaeplastida
Zm00001e028085_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e028135_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e029601_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e030961_P001 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e031799_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e034072_P001 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e035025_P001 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e037510_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e037956_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e038287_P001 No alias transcription factor (MYB) 0.06 Archaeplastida
Zm00001e038964_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e039756_P002 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e041239_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e041547_P001 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e041553_P001 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0009308 amine metabolic process IEP Neighborhood
BP GO:0009690 cytokinin metabolic process IEP Neighborhood
MF GO:0010181 FMN binding IEP Neighborhood
BP GO:0010817 regulation of hormone levels IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Neighborhood
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0019139 cytokinin dehydrogenase activity IEP Neighborhood
BP GO:0034754 cellular hormone metabolic process IEP Neighborhood
BP GO:0042445 hormone metabolic process IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
InterPro domains Description Start Stop
IPR001005 SANT/Myb 68 111
IPR001005 SANT/Myb 15 62
No external refs found!