1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc12g005860.2.1

Solyc12g005860.2.1


Description : aconitase. aconitase


Gene families : OG0001305 (Archaeplastida) Phylogenetic Tree(s): OG0001305_tree ,
OG_05_0001923 (LandPlants) Phylogenetic Tree(s): OG_05_0001923_tree ,
OG_06_0002400 (SeedPlants) Phylogenetic Tree(s): OG_06_0002400_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc12g005860.2.1
Cluster HCCA: Cluster_177

Target Alias Description ECC score Gene Family Method Actions
AT2G05710 ACO3 aconitase 3 0.04 Archaeplastida
AT4G26970 ACO2 aconitase 2 0.04 Archaeplastida
Cpa|evm.model.tig00000889.36 No alias Aconitate hydratase 2, mitochondrial OS=Arabidopsis thaliana 0.02 Archaeplastida
Cre01.g042750 No alias Aconitate hydratase 2, mitochondrial OS=Arabidopsis thaliana 0.04 Archaeplastida
MA_7469g0010 No alias aconitase. aconitase 0.02 Archaeplastida
Smo132907 No alias Lipid metabolism.lipid degradation.fatty acid... 0.03 Archaeplastida
Smo443331 No alias Lipid metabolism.lipid degradation.fatty acid... 0.03 Archaeplastida
Solyc07g052350.3.1 No alias aconitase. aconitase 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Neighborhood
CC GO:0000813 ESCRT I complex IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004107 chorismate synthase activity IEP Neighborhood
MF GO:0004556 alpha-amylase activity IEP Neighborhood
MF GO:0004673 protein histidine kinase activity IEP Neighborhood
MF GO:0005509 calcium ion binding IEP Neighborhood
BP GO:0006801 superoxide metabolic process IEP Neighborhood
BP GO:0006812 cation transport IEP Neighborhood
BP GO:0006813 potassium ion transport IEP Neighborhood
MF GO:0008324 cation transmembrane transporter activity IEP Neighborhood
BP GO:0009072 aromatic amino acid family metabolic process IEP Neighborhood
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Neighborhood
MF GO:0015075 ion transmembrane transporter activity IEP Neighborhood
MF GO:0015077 monovalent inorganic cation transmembrane transporter activity IEP Neighborhood
MF GO:0015079 potassium ion transmembrane transporter activity IEP Neighborhood
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Neighborhood
BP GO:0015672 monovalent inorganic cation transport IEP Neighborhood
MF GO:0016160 amylase activity IEP Neighborhood
BP GO:0016197 endosomal transport IEP Neighborhood
MF GO:0016409 palmitoyltransferase activity IEP Neighborhood
MF GO:0016746 transferase activity, transferring acyl groups IEP Neighborhood
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Neighborhood
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Neighborhood
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Neighborhood
BP GO:0030001 metal ion transport IEP Neighborhood
BP GO:0032509 endosome transport via multivesicular body sorting pathway IEP Neighborhood
BP GO:0034220 ion transmembrane transport IEP Neighborhood
CC GO:0036452 ESCRT complex IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
CC GO:0044433 cytoplasmic vesicle part IEP Neighborhood
CC GO:0044440 endosomal part IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046873 metal ion transmembrane transporter activity IEP Neighborhood
BP GO:0071804 cellular potassium ion transport IEP Neighborhood
BP GO:0071805 potassium ion transmembrane transport IEP Neighborhood
BP GO:0071985 multivesicular body sorting pathway IEP Neighborhood
BP GO:0072593 reactive oxygen species metabolic process IEP Neighborhood
BP GO:0098655 cation transmembrane transport IEP Neighborhood
BP GO:0098660 inorganic ion transmembrane transport IEP Neighborhood
BP GO:0098662 inorganic cation transmembrane transport IEP Neighborhood
InterPro domains Description Start Stop
IPR001030 Acoase/IPM_deHydtase_lsu_aba 148 651
IPR000573 AconitaseA/IPMdHydase_ssu_swvl 780 908
No external refs found!