1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc12g005890.3.1

Solyc12g005890.3.1


Description : Transcription factor MYB101 OS=Arabidopsis thaliana (sp|o80883|mb101_arath : 92.4)


Gene families : OG0000002 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000002 (LandPlants) Phylogenetic Tree(s): OG_05_0000002_tree ,
OG_06_0000006 (SeedPlants) Phylogenetic Tree(s): OG_06_0000006_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc12g005890.3.1
Cluster HCCA: Cluster_238

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00208260 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AMTR_s00024p00224180 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
AMTR_s00037p00177500 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
AT1G09540 ATMYB61, MYB61 myb domain protein 61 0.02 Archaeplastida
AT1G16490 MYB58, ATMYB58 myb domain protein 58 0.02 Archaeplastida
AT1G25340 MYB116, AtMYB116 myb domain protein 116 0.02 Archaeplastida
AT2G32460 ATMYB101, MYB101, ATM1 myb domain protein 101 0.05 Archaeplastida
AT3G01530 MYB57, ATMYB57 myb domain protein 57 0.02 Archaeplastida
AT3G53200 AtMYB27, MYB27 myb domain protein 27 0.03 Archaeplastida
AT4G01680 MYB55, AtMYB55 myb domain protein 55 0.03 Archaeplastida
AT4G09460 MYB6, AtMYB6 myb domain protein 6 0.02 Archaeplastida
AT5G14340 AtMYB40, MYB40 myb domain protein 40 0.03 Archaeplastida
AT5G40360 MYB115, AtMYB115 myb domain protein 115 0.03 Archaeplastida
AT5G67300 MYBR1, MYB44,... myb domain protein r1 0.04 Archaeplastida
GSVIVT01003662001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
GSVIVT01003966001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01011417001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01012447001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01015264001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01018234001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01035332001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
Gb_24073 No alias transcription factor (MYB) 0.03 Archaeplastida
Gb_25814 No alias transcription factor (MYB) 0.07 Archaeplastida
LOC_Os01g03720.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os01g49160.1 No alias transcription factor (MYB) 0.04 Archaeplastida
LOC_Os03g04900.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os03g13310.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os04g43680.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os06g14670.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os06g46560.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os08g33800.1 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_10859g0010 No alias transcription factor (MYB) 0.04 Archaeplastida
MA_12445g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_129382g0010 No alias transcription factor (MYB) 0.04 Archaeplastida
MA_158099g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_1589g0010 No alias transcription factor (MYB) 0.05 Archaeplastida
MA_16413g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_17672g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_33964g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_51173g0010 No alias transcription factor (MYB) 0.04 Archaeplastida
MA_80033g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_8206949g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_95012g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Mp5g14610.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Pp3c17_7730V3.1 No alias myb domain protein 55 0.02 Archaeplastida
Pp3c1_21610V3.1 No alias myb domain protein 103 0.02 Archaeplastida
Pp3c2_250V3.1 No alias No annotation 0.04 Archaeplastida
Pp3c4_13790V3.1 No alias myb domain protein 105 0.03 Archaeplastida
Pp3c6_9970V3.1 No alias myb domain protein 106 0.02 Archaeplastida
Pp3c7_21220V3.1 No alias myb domain protein 105 0.03 Archaeplastida
Solyc07g055000.2.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e012960_P002 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e019501_P001 No alias transcription factor (MYB) 0.05 Archaeplastida
Zm00001e020140_P001 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e022280_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e025724_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e029600_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e030314_P001 No alias transcription factor (MYB) 0.07 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Neighborhood
MF GO:0003779 actin binding IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006820 anion transport IEP Neighborhood
BP GO:0006835 dicarboxylic acid transport IEP Neighborhood
BP GO:0006887 exocytosis IEP Neighborhood
BP GO:0015711 organic anion transport IEP Neighborhood
BP GO:0015740 C4-dicarboxylate transport IEP Neighborhood
BP GO:0015743 malate transport IEP Neighborhood
BP GO:0015849 organic acid transport IEP Neighborhood
BP GO:0016192 vesicle-mediated transport IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0032940 secretion by cell IEP Neighborhood
CC GO:0044448 cell cortex part IEP Neighborhood
BP GO:0046903 secretion IEP Neighborhood
BP GO:0046942 carboxylic acid transport IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
CC GO:0099023 tethering complex IEP Neighborhood
InterPro domains Description Start Stop
IPR001005 SANT/Myb 22 67
No external refs found!