AMTR_s00032p00221170 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00032.228

Description : Protein modification.protein folding and quality control.protein folding catalyst activities.FKBP protein folding catalyst


Gene families : OG0000455 (Archaeplastida) Phylogenetic Tree(s): OG0000455_tree ,
OG_05_0000843 (LandPlants) Phylogenetic Tree(s): OG_05_0000843_tree ,
OG_06_0000775 (SeedPlants) Phylogenetic Tree(s): OG_06_0000775_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00032p00221170
Cluster HCCA: Cluster_119

Target Alias Description ECC score Gene Family Method Actions
AT2G43560 No alias FKBP-like peptidyl-prolyl cis-trans isomerase family protein 0.05 Archaeplastida
AT4G39710 FKBP16-2 FK506-binding protein 16-2 0.04 Archaeplastida
AT5G45680 ATFKBP13, FKBP13 FK506-binding protein 13 0.05 Archaeplastida
Cre10.g454250 No alias Protein modification.protein folding and quality... 0.02 Archaeplastida
Cre16.g675500 No alias Protein modification.protein folding and quality... 0.02 Archaeplastida
GSVIVT01012171001 No alias Protein modification.protein folding and quality... 0.05 Archaeplastida
GSVIVT01022183001 No alias Protein modification.protein folding and quality... 0.03 Archaeplastida
GSVIVT01038097001 No alias Protein modification.protein folding and quality... 0.03 Archaeplastida
LOC_Os02g51570.1 No alias component PnsL4 of NDH lumen subcomplex L. protein... 0.04 Archaeplastida
LOC_Os06g45340.1 No alias protein folding catalyst (FKBP) 0.05 Archaeplastida
Mp2g06290.1 No alias protein folding catalyst (FKBP) 0.07 Archaeplastida
Mp6g04000.1 No alias protein folding catalyst (FKBP) 0.05 Archaeplastida
Pp3c1_3210V3.1 No alias FK506-binding protein 13 0.05 Archaeplastida
Pp3c4_8140V3.1 No alias FKBP-like peptidyl-prolyl cis-trans isomerase family protein 0.03 Archaeplastida
Solyc04g015040.3.1 No alias protein folding catalyst (FKBP) 0.04 Archaeplastida
Solyc04g054520.3.1 No alias component PnsL4 of NDH lumen subcomplex L. protein... 0.02 Archaeplastida
Solyc08g006540.4.1 No alias protein folding catalyst (FKBP) 0.04 Archaeplastida
Zm00001e003727_P001 No alias protein folding catalyst (FKBP) 0.04 Archaeplastida
Zm00001e015866_P001 No alias component PnsL4 of NDH lumen subcomplex L. protein... 0.03 Archaeplastida
Zm00001e037726_P001 No alias protein folding catalyst (FKBP) 0.04 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0006457 protein folding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0004721 phosphoprotein phosphatase activity IEP Neighborhood
MF GO:0004784 superoxide dismutase activity IEP Neighborhood
MF GO:0004813 alanine-tRNA ligase activity IEP Neighborhood
CC GO:0005622 intracellular IEP Neighborhood
CC GO:0005840 ribosome IEP Neighborhood
BP GO:0006419 alanyl-tRNA aminoacylation IEP Neighborhood
BP GO:0006470 protein dephosphorylation IEP Neighborhood
BP GO:0006801 superoxide metabolic process IEP Neighborhood
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Neighborhood
MF GO:0008565 protein transporter activity IEP Neighborhood
BP GO:0016311 dephosphorylation IEP Neighborhood
MF GO:0016721 oxidoreductase activity, acting on superoxide radicals as acceptor IEP Neighborhood
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Neighborhood
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Neighborhood
BP GO:0042254 ribosome biogenesis IEP Neighborhood
BP GO:0044085 cellular component biogenesis IEP Neighborhood
BP GO:0072593 reactive oxygen species metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001179 PPIase_FKBP_dom 86 173
No external refs found!