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  5. Solyc12g006000.1.1

Solyc12g006000.1.1


Description : clathrin assembly protein (AP180)


Gene families : OG0000302 (Archaeplastida) Phylogenetic Tree(s): OG0000302_tree ,
OG_05_0001094 (LandPlants) Phylogenetic Tree(s): OG_05_0001094_tree ,
OG_06_0001837 (SeedPlants) Phylogenetic Tree(s): OG_06_0001837_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc12g006000.1.1
Cluster HCCA: Cluster_151

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00161520 evm_27.TU.AmTr_v1... Vesicle trafficking.clathrin coated vesicle (CCV)... 0.03 Archaeplastida
AMTR_s00028p00200060 evm_27.TU.AmTr_v1... Vesicle trafficking.clathrin coated vesicle (CCV)... 0.14 Archaeplastida
AMTR_s00050p00195040 evm_27.TU.AmTr_v1... Vesicle trafficking.clathrin coated vesicle (CCV)... 0.03 Archaeplastida
AMTR_s00071p00051500 evm_27.TU.AmTr_v1... Vesicle trafficking.clathrin coated vesicle (CCV)... 0.09 Archaeplastida
AMTR_s00106p00058730 evm_27.TU.AmTr_v1... Vesicle trafficking.clathrin coated vesicle (CCV)... 0.03 Archaeplastida
AT1G03050 No alias ENTH/ANTH/VHS superfamily protein 0.15 Archaeplastida
AT2G25430 No alias epsin N-terminal homology (ENTH) domain-containing... 0.03 Archaeplastida
AT4G02650 No alias ENTH/ANTH/VHS superfamily protein 0.16 Archaeplastida
AT5G35200 No alias ENTH/ANTH/VHS superfamily protein 0.05 Archaeplastida
AT5G57200 No alias ENTH/ANTH/VHS superfamily protein 0.05 Archaeplastida
Cpa|evm.model.tig00000241.123 No alias Putative clathrin assembly protein At4g25940... 0.02 Archaeplastida
Cre09.g393136 No alias Vesicle trafficking.clathrin coated vesicle (CCV)... 0.02 Archaeplastida
GSVIVT01010864001 No alias Vesicle trafficking.clathrin coated vesicle (CCV)... 0.02 Archaeplastida
GSVIVT01029746001 No alias Vesicle trafficking.clathrin coated vesicle (CCV)... 0.12 Archaeplastida
GSVIVT01030504001 No alias Vesicle trafficking.clathrin coated vesicle (CCV)... 0.04 Archaeplastida
GSVIVT01035864001 No alias Vesicle trafficking.clathrin coated vesicle (CCV)... 0.03 Archaeplastida
Gb_35012 No alias component CAP1/ECA4 of TPLATE AP-2 co-adaptor complex 0.05 Archaeplastida
LOC_Os02g07900.1 No alias ECA1/2 clathrin coated vesicle adaptor protein 0.11 Archaeplastida
LOC_Os03g16800.1 No alias component CAP1/ECA4 of TPLATE AP-2 co-adaptor complex 0.05 Archaeplastida
LOC_Os05g02140.1 No alias ECA1/2 clathrin coated vesicle adaptor protein 0.02 Archaeplastida
LOC_Os05g35160.1 No alias ECA1/2 clathrin coated vesicle adaptor protein 0.04 Archaeplastida
LOC_Os06g45050.1 No alias Putative clathrin assembly protein At5g57200... 0.07 Archaeplastida
Mp3g16270.1 No alias Putative clathrin assembly protein At2g25430... 0.02 Archaeplastida
Pp3c15_5020V3.1 No alias epsin N-terminal homology (ENTH) domain-containing... 0.03 Archaeplastida
Smo440070 No alias Putative clathrin assembly protein At4g02650... 0.02 Archaeplastida
Solyc06g011450.3.1 No alias component CAP1/ECA4 of TPLATE AP-2 co-adaptor complex 0.03 Archaeplastida
Solyc07g007820.3.1 No alias Putative clathrin assembly protein At5g35200... 0.07 Archaeplastida
Solyc12g010530.3.1 No alias Putative clathrin assembly protein At5g35200... 0.03 Archaeplastida
Zm00001e013776_P003 No alias ECA1/2 clathrin coated vesicle adaptor protein 0.09 Archaeplastida
Zm00001e030401_P001 No alias ECA1/2 clathrin coated vesicle adaptor protein 0.12 Archaeplastida
Zm00001e036365_P001 No alias Putative clathrin assembly protein At5g35200... 0.03 Archaeplastida
Zm00001e038481_P001 No alias component CAP1/ECA4 of TPLATE AP-2 co-adaptor complex 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005543 phospholipid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0003774 motor activity IEP Neighborhood
MF GO:0003777 microtubule motor activity IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0004857 enzyme inhibitor activity IEP Neighborhood
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005088 Ras guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005089 Rho guanyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0005509 calcium ion binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0006928 movement of cell or subcellular component IEP Neighborhood
BP GO:0007017 microtubule-based process IEP Neighborhood
BP GO:0007018 microtubule-based movement IEP Neighborhood
MF GO:0008017 microtubule binding IEP Neighborhood
MF GO:0008081 phosphoric diester hydrolase activity IEP Neighborhood
MF GO:0008092 cytoskeletal protein binding IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
BP GO:0009606 tropism IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0010215 cellulose microfibril organization IEP Neighborhood
BP GO:0010274 hydrotropism IEP Neighborhood
MF GO:0015631 tubulin binding IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0016837 carbon-oxygen lyase activity, acting on polysaccharides IEP Neighborhood
MF GO:0017016 Ras GTPase binding IEP Neighborhood
MF GO:0017048 Rho GTPase binding IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
MF GO:0019899 enzyme binding IEP Neighborhood
BP GO:0030198 extracellular matrix organization IEP Neighborhood
MF GO:0030234 enzyme regulator activity IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0030570 pectate lyase activity IEP Neighborhood
MF GO:0030599 pectinesterase activity IEP Neighborhood
CC GO:0031225 anchored component of membrane IEP Neighborhood
MF GO:0031267 small GTPase binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
BP GO:0042545 cell wall modification IEP Neighborhood
BP GO:0043062 extracellular structure organization IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
BP GO:0045229 external encapsulating structure organization IEP Neighborhood
MF GO:0051020 GTPase binding IEP Neighborhood
MF GO:0052689 carboxylic ester hydrolase activity IEP Neighborhood
BP GO:0071554 cell wall organization or biogenesis IEP Neighborhood
BP GO:0071555 cell wall organization IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:0098772 molecular function regulator IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR011417 ANTH_dom 30 317
No external refs found!