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  5. Solyc12g006080.2.1

Solyc12g006080.2.1


Description : no hits & (original description: none)


Gene families : OG0000954 (Archaeplastida) Phylogenetic Tree(s): OG0000954_tree ,
OG_05_0000573 (LandPlants) Phylogenetic Tree(s): OG_05_0000573_tree ,
OG_06_0001100 (SeedPlants) Phylogenetic Tree(s): OG_06_0001100_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc12g006080.2.1
Cluster HCCA: Cluster_41

Target Alias Description ECC score Gene Family Method Actions
AT3G48450 No alias RPM1-interacting protein 4 (RIN4) family protein 0.04 Archaeplastida
AT4G35655 No alias RPM1-interacting protein 4 (RIN4) family protein 0.02 Archaeplastida
AT5G40645 No alias RPM1-interacting protein 4 (RIN4) family protein 0.03 Archaeplastida
GSVIVT01014701001 No alias No description available 0.03 Archaeplastida
GSVIVT01030113001 No alias No description available 0.03 Archaeplastida
LOC_Os02g49340.1 No alias no hits & (original description: none) 0.07 Archaeplastida
Zm00001e023408_P001 No alias no hits & (original description: none) 0.09 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEP Neighborhood
MF GO:0005092 GDP-dissociation inhibitor activity IEP Neighborhood
MF GO:0005094 Rho GDP-dissociation inhibitor activity IEP Neighborhood
MF GO:0005215 transporter activity IEP Neighborhood
MF GO:0005319 lipid transporter activity IEP Neighborhood
CC GO:0005737 cytoplasm IEP Neighborhood
BP GO:0006020 inositol metabolic process IEP Neighborhood
BP GO:0006066 alcohol metabolic process IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006869 lipid transport IEP Neighborhood
BP GO:0006979 response to oxidative stress IEP Neighborhood
BP GO:0008272 sulfate transport IEP Neighborhood
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Neighborhood
MF GO:0015116 sulfate transmembrane transporter activity IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
MF GO:0016209 antioxidant activity IEP Neighborhood
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Neighborhood
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Neighborhood
MF GO:0016837 carbon-oxygen lyase activity, acting on polysaccharides IEP Neighborhood
BP GO:0019310 inositol catabolic process IEP Neighborhood
BP GO:0019751 polyol metabolic process IEP Neighborhood
MF GO:0030570 pectate lyase activity IEP Neighborhood
MF GO:0030695 GTPase regulator activity IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
BP GO:0044275 cellular carbohydrate catabolic process IEP Neighborhood
BP GO:0044282 small molecule catabolic process IEP Neighborhood
BP GO:0046164 alcohol catabolic process IEP Neighborhood
BP GO:0046174 polyol catabolic process IEP Neighborhood
MF GO:0050113 inositol oxygenase activity IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0061024 membrane organization IEP Neighborhood
BP GO:0072348 sulfur compound transport IEP Neighborhood
BP GO:0120009 intermembrane lipid transfer IEP Neighborhood
MF GO:0120013 intermembrane lipid transfer activity IEP Neighborhood
BP GO:1901616 organic hydroxy compound catabolic process IEP Neighborhood
MF GO:1901682 sulfur compound transmembrane transporter activity IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!