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  5. Solyc12g006110.3.1

Solyc12g006110.3.1


Description : fasciclin-type arabinogalactan protein


Gene families : OG0000381 (Archaeplastida) Phylogenetic Tree(s): OG0000381_tree ,
OG_05_0000190 (LandPlants) Phylogenetic Tree(s): OG_05_0000190_tree ,
OG_06_0000684 (SeedPlants) Phylogenetic Tree(s): OG_06_0000684_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc12g006110.3.1
Cluster HCCA: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
AT3G46550 SOS5 Fasciclin-like arabinogalactan family protein 0.03 Archaeplastida
AT4G12730 FLA2 FASCICLIN-like arabinogalactan 2 0.07 Archaeplastida
GSVIVT01014684001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.03 Archaeplastida
Gb_27317 No alias fasciclin-type arabinogalactan protein. regulatory... 0.03 Archaeplastida
LOC_Os01g62380.1 No alias fasciclin-type arabinogalactan protein. regulatory... 0.05 Archaeplastida
LOC_Os02g26320.1 No alias fasciclin-type arabinogalactan protein 0.03 Archaeplastida
LOC_Os02g49420.1 No alias fasciclin-type arabinogalactan protein 0.03 Archaeplastida
LOC_Os03g03600.1 No alias fasciclin-type arabinogalactan protein 0.07 Archaeplastida
LOC_Os04g48490.1 No alias fasciclin-type arabinogalactan protein 0.03 Archaeplastida
LOC_Os05g38500.1 No alias fasciclin-type arabinogalactan protein. regulatory... 0.05 Archaeplastida
LOC_Os08g23180.1 No alias fasciclin-type arabinogalactan protein 0.08 Archaeplastida
LOC_Os08g38270.1 No alias fasciclin-type arabinogalactan protein 0.05 Archaeplastida
LOC_Os09g07350.1 No alias fasciclin-type arabinogalactan protein 0.07 Archaeplastida
LOC_Os09g30010.1 No alias fasciclin-type arabinogalactan protein 0.03 Archaeplastida
MA_137299g0010 No alias fasciclin-type arabinogalactan protein. regulatory... 0.02 Archaeplastida
MA_16264g0020 No alias fasciclin-type arabinogalactan protein. regulatory... 0.04 Archaeplastida
Mp4g14280.1 No alias fasciclin-type arabinogalactan protein 0.03 Archaeplastida
Mp5g05390.1 No alias fasciclin-type arabinogalactan protein 0.03 Archaeplastida
Mp5g05430.1 No alias fasciclin-type arabinogalactan protein 0.04 Archaeplastida
Mp5g05440.1 No alias fasciclin-type arabinogalactan protein 0.04 Archaeplastida
Mp5g05450.1 No alias fasciclin-type arabinogalactan protein 0.03 Archaeplastida
Mp5g05460.1 No alias fasciclin-type arabinogalactan protein 0.03 Archaeplastida
Mp5g10880.1 No alias fasciclin-type arabinogalactan protein 0.03 Archaeplastida
Pp3c26_5590V3.1 No alias Fasciclin-like arabinogalactan family protein 0.02 Archaeplastida
Pp3c4_16840V3.1 No alias FASCICLIN-like arabinogalactan protein 8 0.04 Archaeplastida
Smo441324 No alias Fasciclin-like arabinogalactan protein 8 OS=Arabidopsis thaliana 0.04 Archaeplastida
Solyc08g006295.1.1 No alias fasciclin-type arabinogalactan protein 0.04 Archaeplastida
Zm00001e023434_P001 No alias fasciclin-type arabinogalactan protein 0.03 Archaeplastida
Zm00001e024334_P001 No alias fasciclin-type arabinogalactan protein 0.02 Archaeplastida
Zm00001e028773_P001 No alias fasciclin-type arabinogalactan protein. regulatory... 0.03 Archaeplastida
Zm00001e031109_P001 No alias fasciclin-type arabinogalactan protein 0.07 Archaeplastida
Zm00001e031831_P001 No alias fasciclin-type arabinogalactan protein. regulatory... 0.03 Archaeplastida
Zm00001e033729_P002 No alias fasciclin-type arabinogalactan protein 0.07 Archaeplastida
Zm00001e036843_P001 No alias fasciclin-type arabinogalactan protein 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004601 peroxidase activity IEP Neighborhood
MF GO:0005215 transporter activity IEP Neighborhood
MF GO:0005507 copper ion binding IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0006979 response to oxidative stress IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0015267 channel activity IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
MF GO:0016209 antioxidant activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0022803 passive transmembrane transporter activity IEP Neighborhood
MF GO:0022857 transmembrane transporter activity IEP Neighborhood
BP GO:0030001 metal ion transport IEP Neighborhood
MF GO:0030976 thiamine pyrophosphate binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
MF GO:1901681 sulfur compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR000782 FAS1_domain 33 111
IPR000782 FAS1_domain 195 326
No external refs found!