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  5. Solyc12g006800.2.1

Solyc12g006800.2.1


Description : G2-like GARP transcription factor


Gene families : OG0001192 (Archaeplastida) Phylogenetic Tree(s): OG0001192_tree ,
OG_05_0000884 (LandPlants) Phylogenetic Tree(s): OG_05_0000884_tree ,
OG_06_0000674 (SeedPlants) Phylogenetic Tree(s): OG_06_0000674_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc12g006800.2.1
Cluster HCCA: Cluster_122

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00122p00127250 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.05 Archaeplastida
AT1G13300 HRS1 myb-like transcription factor family protein 0.03 Archaeplastida
AT2G03500 No alias Homeodomain-like superfamily protein 0.17 Archaeplastida
AT4G37180 No alias Homeodomain-like superfamily protein 0.03 Archaeplastida
GSVIVT01011942001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01015462001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.14 Archaeplastida
GSVIVT01031804001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
LOC_Os01g08160.1 No alias G2-like GARP transcription factor 0.07 Archaeplastida
LOC_Os03g55590.1 No alias G2-like GARP transcription factor 0.04 Archaeplastida
LOC_Os07g02800.3 No alias G2-like GARP transcription factor 0.02 Archaeplastida
Mp4g15170.1 No alias G2-like GARP transcription factor 0.03 Archaeplastida
Smo402040 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
Zm00001e016724_P001 No alias G2-like GARP transcription factor 0.1 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0030001 metal ion transport IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
MF GO:0043531 ADP binding IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001005 SANT/Myb 241 292
No external refs found!