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  5. Solyc12g006980.2.1

Solyc12g006980.2.1


Description : LRR-domain extensin


Gene families : OG0000279 (Archaeplastida) Phylogenetic Tree(s): OG0000279_tree ,
OG_05_0000206 (LandPlants) Phylogenetic Tree(s): OG_05_0000206_tree ,
OG_06_0000158 (SeedPlants) Phylogenetic Tree(s): OG_06_0000158_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc12g006980.2.1
Cluster HCCA: Cluster_31

Target Alias Description ECC score Gene Family Method Actions
AT1G49490 No alias Leucine-rich repeat (LRR) family protein 0.06 Archaeplastida
AT1G49750 No alias Leucine-rich repeat (LRR) family protein 0.03 Archaeplastida
AT2G15880 No alias Leucine-rich repeat (LRR) family protein 0.05 Archaeplastida
AT3G19020 No alias Leucine-rich repeat (LRR) family protein 0.05 Archaeplastida
AT4G13340 No alias Leucine-rich repeat (LRR) family protein 0.04 Archaeplastida
AT4G33970 No alias Leucine-rich repeat (LRR) family protein 0.02 Archaeplastida
LOC_Os01g25460.1 No alias LRR-domain extensin 0.02 Archaeplastida
MA_5516756g0010 No alias LRR-domain extensin 0.03 Archaeplastida
Mp8g04500.1 No alias Leucine-rich repeat extensin-like protein 1... 0.07 Archaeplastida
Pp3c4_3520V3.1 No alias Leucine-rich repeat (LRR) family protein 0.02 Archaeplastida
Solyc10g050110.1.1 No alias Uncharacterized protein At4g06744 OS=Arabidopsis... 0.03 Archaeplastida
Zm00001e013618_P001 No alias LRR-domain extensin 0.05 Archaeplastida
Zm00001e016681_P001 No alias LRR-domain extensin 0.04 Archaeplastida
Zm00001e025924_P001 No alias LRR-domain extensin 0.03 Archaeplastida
Zm00001e026840_P001 No alias LRR-domain extensin 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003774 motor activity IEP Neighborhood
MF GO:0004842 ubiquitin-protein transferase activity IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
MF GO:0008081 phosphoric diester hydrolase activity IEP Neighborhood
BP GO:0010215 cellulose microfibril organization IEP Neighborhood
CC GO:0016459 myosin complex IEP Neighborhood
BP GO:0016567 protein ubiquitination IEP Neighborhood
MF GO:0019787 ubiquitin-like protein transferase activity IEP Neighborhood
BP GO:0030198 extracellular matrix organization IEP Neighborhood
CC GO:0031225 anchored component of membrane IEP Neighborhood
CC GO:0031226 intrinsic component of plasma membrane IEP Neighborhood
BP GO:0032446 protein modification by small protein conjugation IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
MF GO:0042578 phosphoric ester hydrolase activity IEP Neighborhood
BP GO:0043062 extracellular structure organization IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
CC GO:0044430 cytoskeletal part IEP Neighborhood
CC GO:0044459 plasma membrane part IEP Neighborhood
CC GO:0046658 anchored component of plasma membrane IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!