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Description : mRNA-binding regulatory factor (TZF)
Gene families : OG0001103 (Archaeplastida) Phylogenetic Tree(s): OG0001103_tree ,
OG_05_0000849 (LandPlants) Phylogenetic Tree(s): OG_05_0000849_tree ,
OG_06_0000726 (SeedPlants) Phylogenetic Tree(s): OG_06_0000726_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Solyc12g008660.1.1 | |
| Cluster | HCCA: Cluster_280 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G03790 | SOM | Zinc finger C-x8-C-x5-C-x3-H type family protein | 0.03 | Archaeplastida | |
| AT5G07500 | PEI1 | Zinc finger C-x8-C-x5-C-x3-H type family protein | 0.02 | Archaeplastida | |
| Cre03.g146267 | No alias | RNA biosynthesis.transcriptional activation.C3H zinc... | 0.06 | Archaeplastida | |
| LOC_Os01g53650.1 | No alias | mRNA-binding regulatory factor (TZF) | 0.01 | Archaeplastida | |
| LOC_Os05g45020.1 | No alias | mRNA-binding regulatory factor (TZF) | 0.02 | Archaeplastida | |
| LOC_Os07g47240.1 | No alias | mRNA-binding regulatory factor (TZF) | 0.01 | Archaeplastida | |
| Mp6g00540.1 | No alias | mRNA-binding regulatory factor (TZF) | 0.01 | Archaeplastida | |
| Solyc07g053750.1.1 | No alias | mRNA-binding regulatory factor (TZF) | 0.01 | Archaeplastida | |
| Zm00001e027454_P001 | No alias | mRNA-binding regulatory factor (TZF) | 0.05 | Archaeplastida | |
| Zm00001e032199_P001 | No alias | mRNA-binding regulatory factor (TZF) | 0.02 | Archaeplastida | |
| Zm00001e035805_P001 | No alias | mRNA-binding regulatory factor (TZF) | 0.01 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0046872 | metal ion binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003723 | RNA binding | IEP | Neighborhood |
| MF | GO:0016491 | oxidoreductase activity | IEP | Neighborhood |
| MF | GO:0016701 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen | IEP | Neighborhood |
| MF | GO:0016702 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen | IEP | Neighborhood |
| MF | GO:0051213 | dioxygenase activity | IEP | Neighborhood |
| BP | GO:0055114 | oxidation-reduction process | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR000571 | Znf_CCCH | 161 | 181 |
| No external refs found! |