Solyc12g008800.3.1


Description : transcription factor (MYB-related)


Gene families : OG0000067 (Archaeplastida) Phylogenetic Tree(s): OG0000067_tree ,
OG_05_0000426 (LandPlants) Phylogenetic Tree(s): OG_05_0000426_tree ,
OG_06_0000467 (SeedPlants) Phylogenetic Tree(s): OG_06_0000467_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc12g008800.3.1
Cluster HCCA: Cluster_232

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00045p00040070 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.06 Archaeplastida
AT1G70000 No alias myb-like transcription factor family protein 0.03 Archaeplastida
AT3G10590 No alias Duplicated homeodomain-like superfamily protein 0.03 Archaeplastida
AT5G56840 No alias myb-like transcription factor family protein 0.03 Archaeplastida
GSVIVT01014754001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
GSVIVT01014756001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.06 Archaeplastida
GSVIVT01016370001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01036090001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
Gb_35973 No alias transcription factor (MYB-related) 0.02 Archaeplastida
LOC_Os01g09280.1 No alias transcription factor (MYB-related) 0.03 Archaeplastida
LOC_Os02g47744.1 No alias transcription factor (MYB-related) 0.03 Archaeplastida
LOC_Os05g37730.1 No alias transcription factor (MYB-related) 0.02 Archaeplastida
MA_209399g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_254136g0010 No alias transcription factor (MYB-related) 0.08 Archaeplastida
MA_267974g0010 No alias transcription factor (MYB-related) 0.02 Archaeplastida
MA_488767g0010 No alias transcription factor (MYB-related) 0.02 Archaeplastida
MA_6326342g0010 No alias transcription factor (MYB-related) 0.02 Archaeplastida
Solyc03g113620.3.1 No alias transcription factor (MYB-related) 0.06 Archaeplastida
Solyc05g052610.3.1 No alias transcription factor (MYB-related) 0.05 Archaeplastida
Zm00001e016939_P001 No alias transcription factor (MYB-related) 0.05 Archaeplastida
Zm00001e020633_P001 No alias transcription factor (MYB-related) 0.04 Archaeplastida
Zm00001e025783_P002 No alias transcription factor (MYB-related) 0.03 Archaeplastida
Zm00001e025784_P001 No alias transcription factor (MYB-related) 0.02 Archaeplastida
Zm00001e027835_P005 No alias transcription factor (MYB-related) 0.03 Archaeplastida
Zm00001e028675_P001 No alias transcription factor (MYB-related) 0.04 Archaeplastida
Zm00001e032519_P001 No alias transcription factor (MYB-related) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEP Neighborhood
MF GO:0015267 channel activity IEP Neighborhood
MF GO:0022803 passive transmembrane transporter activity IEP Neighborhood
MF GO:0022838 substrate-specific channel activity IEP Neighborhood
InterPro domains Description Start Stop
IPR001005 SANT/Myb 118 162
No external refs found!