AT1G47210 (CYCA3;2)

Aliases : CYCA3;2

Description : cyclin-dependent protein kinase 3;2

Gene families : OG0000635 (Archaeplastida) Phylogenetic Tree(s): OG0000635_tree ,
OG_05_0000438 (LandPlants) Phylogenetic Tree(s): OG_05_0000438_tree ,
OG_06_0000371 (SeedPlants) Phylogenetic Tree(s): OG_06_0000371_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G47210

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00001p00272790	evm_27.TU.AmTr_v1...	Cell cycle.regulation.cyclins.CYCA-type cyclin	0.03	Archaeplastida
AMTR_s00068p00198800	No alias	Cell cycle.regulation.cyclins.CYCA-type cyclin	0.03	Archaeplastida
AT1G80370	CYCA2;4	Cyclin A2;4	0.04	Archaeplastida
Cpa\|evm.model.tig00000076.67	No alias	Cyclin-A2-1 OS=Oryza sativa subsp. japonica	0.02	Archaeplastida
Cre03.g207900	No alias	Cell cycle.regulation.cyclins.CYCA-type cyclin	0.02	Archaeplastida
GSVIVT01008823001	No alias	Cell cycle.regulation.cyclins.CYCA-type cyclin	0.03	Archaeplastida
GSVIVT01009399001	No alias	Cell cycle.regulation.cyclins.CYCA-type cyclin	0.04	Archaeplastida
GSVIVT01035718001	No alias	Cell cycle.regulation.cyclins.CYCA-type cyclin	0.04	Archaeplastida
Gb_03779	No alias	cyclin (CYCA)	0.04	Archaeplastida
Gb_21011	No alias	cyclin (CYCA)	0.03	Archaeplastida
LOC_Os03g41100.1	No alias	cyclin (CYCA)	0.03	Archaeplastida
LOC_Os12g39210.1	No alias	cyclin (CYCA)	0.02	Archaeplastida
MA_103138g0010	No alias	cyclin (CYCA)	0.03	Archaeplastida
MA_28323g0010	No alias	cyclin (CYCA)	0.03	Archaeplastida
MA_6619g0010	No alias	cyclin (CYCA)	0.02	Archaeplastida
MA_88982g0010	No alias	cyclin (CYCA)	0.03	Archaeplastida
Mp2g25500.1	No alias	cyclin (CYCA)	0.06	Archaeplastida
Pp3c1_39100V3.1	No alias	Cyclin A1;1	0.02	Archaeplastida
Solyc10g049360.2.1	No alias	cyclin (CYCA)	0.04	Archaeplastida
Solyc12g088500.2.1	No alias	cyclin (CYCA)	0.06	Archaeplastida
Solyc12g088520.2.1	No alias	cyclin (CYCA)	0.06	Archaeplastida
Zm00001e017335_P001	No alias	cyclin (CYCA)	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004672	protein kinase activity	None	Extended
MF	GO:0004674	protein serine/threonine kinase activity	None	Extended
MF	GO:0004693	cyclin-dependent protein serine/threonine kinase activity	ISS	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IDA	Interproscan
CC	GO:0005737	cytoplasm	IDA	Interproscan
BP	GO:0008150	biological_process	None	Extended
MF	GO:0016301	kinase activity	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	None	Extended
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051726	regulation of cell cycle	ISS	Interproscan
MF	GO:0060089	molecular transducer activity	None	Extended
BP	GO:0065007	biological regulation	None	Extended
MF	GO:0097472	cyclin-dependent protein kinase activity	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000724	double-strand break repair via homologous recombination	IEP	Neighborhood
BP	GO:0000725	recombinational repair	IEP	Neighborhood
MF	GO:0003712	transcription coregulator activity	IEP	Neighborhood
MF	GO:0003713	transcription coactivator activity	IEP	Neighborhood
CC	GO:0005622	intracellular	IEP	Neighborhood
CC	GO:0005657	replication fork	IEP	Neighborhood
BP	GO:0006139	nucleobase-containing compound metabolic process	IEP	Neighborhood
BP	GO:0006259	DNA metabolic process	IEP	Neighborhood
BP	GO:0006260	DNA replication	IEP	Neighborhood
BP	GO:0006261	DNA-dependent DNA replication	IEP	Neighborhood
BP	GO:0006270	DNA replication initiation	IEP	Neighborhood
BP	GO:0006275	regulation of DNA replication	IEP	Neighborhood
BP	GO:0006302	double-strand break repair	IEP	Neighborhood
BP	GO:0007346	regulation of mitotic cell cycle	IEP	Neighborhood
MF	GO:0008173	RNA methyltransferase activity	IEP	Neighborhood
MF	GO:0009044	xylan 1,4-beta-xylosidase activity	IEP	Neighborhood
BP	GO:0009934	regulation of meristem structural organization	IEP	Neighborhood
BP	GO:0010389	regulation of G2/M transition of mitotic cell cycle	IEP	Neighborhood
BP	GO:0010440	stomatal lineage progression	IEP	Neighborhood
BP	GO:0016444	somatic cell DNA recombination	IEP	Neighborhood
MF	GO:0016538	cyclin-dependent protein serine/threonine kinase regulator activity	IEP	Neighborhood
MF	GO:0019207	kinase regulator activity	IEP	Neighborhood
MF	GO:0019887	protein kinase regulator activity	IEP	Neighborhood
CC	GO:0044427	chromosomal part	IEP	Neighborhood
BP	GO:0046483	heterocycle metabolic process	IEP	Neighborhood
BP	GO:0048451	petal formation	IEP	Neighborhood
BP	GO:0048453	sepal formation	IEP	Neighborhood
BP	GO:0051052	regulation of DNA metabolic process	IEP	Neighborhood
BP	GO:0090304	nucleic acid metabolic process	IEP	Neighborhood
MF	GO:0097599	xylanase activity	IEP	Neighborhood
BP	GO:1901987	regulation of cell cycle phase transition	IEP	Neighborhood
BP	GO:1901990	regulation of mitotic cell cycle phase transition	IEP	Neighborhood
BP	GO:1902749	regulation of cell cycle G2/M phase transition	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR006671	Cyclin_N	105	192

External Links

No external refs found!

AT1G47210 (CYCA3;2)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation