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  5. Solyc12g009210.2.1

Solyc12g009210.2.1


Description : Probable polygalacturonase OS=Vitis vinifera (sp|a7pzl3|pglr_vitvi : 340.0) & Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase(50.3.2 : 84.9)


Gene families : OG0000349 (Archaeplastida) Phylogenetic Tree(s): OG0000349_tree ,
OG_05_0004328 (LandPlants) Phylogenetic Tree(s): OG_05_0004328_tree ,
OG_06_0003745 (SeedPlants) Phylogenetic Tree(s): OG_06_0003745_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc12g009210.2.1
Cluster HCCA: Cluster_212

Target Alias Description ECC score Gene Family Method Actions
MA_10436451g0020 No alias Probable polygalacturonase OS=Vitis vinifera... 0.03 Archaeplastida
Pp3c24_2470V3.1 No alias Pectin lyase-like superfamily protein 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004107 chorismate synthase activity IEP Neighborhood
BP GO:0008652 cellular amino acid biosynthetic process IEP Neighborhood
BP GO:0009072 aromatic amino acid family metabolic process IEP Neighborhood
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Neighborhood
MF GO:0016835 carbon-oxygen lyase activity IEP Neighborhood
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Neighborhood
InterPro domains Description Start Stop
IPR000743 Glyco_hydro_28 168 455
No external refs found!